RNA–Protein interactions for RNA: ENST00000586435.1

LIG3-209, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-209ENST00000586435 OR51M1Q9H341 326 aa8.06□□□□□ -1.12
LIG3-209ENST00000586435 GPN1Q9HCN4 374 aaPredicted RBP8.06□□□□□ -1.12
LIG3-209ENST00000586435 TNFRSF18Q9Y5U5 241 aa8.06□□□□□ -1.12
LIG3-209ENST00000586435 K7EQD1 137 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 PRAF2O60831 178 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 DNAH10OSP0CZ25 163 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 INAFM2P0DMQ5 153 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 SRIP30626 198 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 ZNF266Q14584 549 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 Q6ZQT7 251 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 MIR17HGQ75NE6 70 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 RASL10AQ92737 203 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 KCNIP2Q9NS61 270 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 MSRB1Q9NZV6 116 aa8.05□□□□□ -1.12
LIG3-209ENST00000586435 TRGV4A0A0C4DH28 118 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 IFNA5P01569 189 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 ORM1P02763 201 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 FUSP35637 526 aaKnown RBP eCLIP8.04□□□□□ -1.12
LIG3-209ENST00000586435 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 Q5VSD8 79 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 Q6AWC8 147 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 Q8TAT8 98 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 FRZBQ92765 325 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 PHYHIPLQ96FC7 376 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 SPXQ9BT56 116 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 PAXXQ9BUH6 204 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 LENEPQ9Y5L5 61 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 HERC1Q15751 4861 aa8.04□□□□□ -1.12
LIG3-209ENST00000586435 TRGV11A0A075B6L2 103 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 EVI2AP22794 236 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 CSN1S1P47710 185 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 NHLH2Q02577 135 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 C10orf126Q8N4M7 172 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 THAP6Q8TBB0 222 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 PCNPQ8WW12 178 aaKnown RBP8.03□□□□□ -1.12
LIG3-209ENST00000586435 ZNF479Q96JC4 524 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 CCDC32Q9BV29 185 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 MDFICQ9P1T7 246 aa8.03□□□□□ -1.12
LIG3-209ENST00000586435 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
LIG3-209ENST00000586435 C9JCJ5 164 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 E5RGE8 158 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 OR10J4P0C629 311 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 SFTA3P0C7M3 94 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 GYPEP15421 78 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 TDRG1Q3Y452 100 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 MUC21Q5SSG8 566 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 TMED6Q8WW62 240 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 TXNDC17Q9BRA2 123 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 WDR61Q9GZS3 305 aaKnown RBP8.02□□□□□ -1.13
LIG3-209ENST00000586435 SLC25A31Q9H0C2 315 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
LIG3-209ENST00000586435 TRAV4A0A0B4J268 109 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 OR7C2O60412 319 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 TIRAPP58753 221 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 FAM159AQ6UWV7 190 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 SH2D6Q7Z4S9 175 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 FAT1Q14517 4588 aa8.01□□□□□ -1.13
LIG3-209ENST00000586435 FAM240BA0A1B0GVZ2 78 aa8□□□□□ -1.13
LIG3-209ENST00000586435 DIRC3C9JPN6 131 aa8□□□□□ -1.13
LIG3-209ENST00000586435 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
LIG3-209ENST00000586435 CRYGDP07320 174 aa8□□□□□ -1.13
LIG3-209ENST00000586435 GCSHP23434 173 aa8□□□□□ -1.13
LIG3-209ENST00000586435 RANP62826 216 aaKnown RBP8□□□□□ -1.13
LIG3-209ENST00000586435 UBE2L3P68036 154 aaKnown RBP8□□□□□ -1.13
LIG3-209ENST00000586435 TMEM183BQ1AE95 376 aa8□□□□□ -1.13
LIG3-209ENST00000586435 TMEM183AQ8IXX5 376 aa8□□□□□ -1.13
LIG3-209ENST00000586435 NMES1Q9C002 83 aa8□□□□□ -1.13
LIG3-209ENST00000586435 KHDC3LQ587J8 217 aa7.99□□□□□ -1.13
LIG3-209ENST00000586435 NTN5Q8WTR8 489 aaPredicted RBP7.99□□□□□ -1.13
LIG3-209ENST00000586435 TMEM70Q9BUB7 260 aa7.99□□□□□ -1.13
LIG3-209ENST00000586435 OR5AC2Q9NZP5 309 aa7.99□□□□□ -1.13
LIG3-209ENST00000586435 BOLA1Q9Y3E2 137 aa7.99□□□□□ -1.13
LIG3-209ENST00000586435 LRCOL1A6NCL2 159 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 H0YIZ8 118 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 M0R2P5 195 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 TAS2R45P59539 299 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 LINC01556Q5JQF7 62 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 MZT2BQ6NZ67 158 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 OR4C5Q8NGB2 326 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 ATP5SQ99766 215 aa7.98□□□□□ -1.13
LIG3-209ENST00000586435 MYCBP2O75592 4640 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 IGHV3-16A0A0C4DH30 117 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 IGHV3-38A0A0C4DH36 116 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 CYCSP99999 105 aaKnown RBP7.97□□□□□ -1.13
LIG3-209ENST00000586435 ASAH1Q13510 395 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 ARL6IP6Q8N6S5 226 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 OTORQ9NRC9 128 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 NDUFA13Q9P0J0 144 aa7.97□□□□□ -1.13
LIG3-209ENST00000586435 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
LIG3-209ENST00000586435 TRAV21A0A0B4J279 112 aa7.96□□□□□ -1.14
LIG3-209ENST00000586435 LOC100131303A0A0U1RQF7 123 aa7.96□□□□□ -1.14
LIG3-209ENST00000586435 FAM229AH3BQW9 127 aa7.96□□□□□ -1.14
LIG3-209ENST00000586435 PSCAO43653 123 aa7.96□□□□□ -1.14
LIG3-209ENST00000586435 SIX6O95475 246 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms