RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 BCAP31P51572 246 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 ZNF138P52744 262 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 VAMP2P63027 116 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 BAXQ07812 192 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 ZNF415Q09FC8 603 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 IL15RAQ13261 267 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 WFDC2Q14508 124 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 MIR17HGQ75NE6 70 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 C12orf45Q8N5I9 185 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-225ENST00000586385 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-225ENST00000586385 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
BRCA1-225ENST00000586385 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-225ENST00000586385 FGF7P21781 194 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 SULT1A1P50225 295 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 ZNF266Q14584 549 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 Q6ZSA8 131 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 TMEM252Q8N6L7 170 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 Q8N814 137 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 PHYHIPLQ96FC7 376 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
BRCA1-225ENST00000586385 C20orf85Q9H1P6 137 aa7.92□□□□□ -1.14
BRCA1-225ENST00000586385 LYRM2Q9NU23 88 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-225ENST00000586385 TRBV7-9A0A0J9YWB2 115 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 PLA2G10O15496 165 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 ORM1P02763 201 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 NBEAP1P0C6P0 100 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 TIRAPP58753 221 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 TMEM183BQ1AE95 376 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 SPANXN2Q5MJ10 180 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 TRIQKQ629K1 86 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 TMEM183AQ8IXX5 376 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 C10orf126Q8N4M7 172 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 SEC22CQ9BRL7 303 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 NPCDR1Q9BY65 106 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
BRCA1-225ENST00000586385 TRAV4A0A0B4J268 109 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 IGHV3-38A0A0C4DH36 116 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 FAM25EA8MYX2 175 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 IBA57-AS1B1ANH7 110 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 OR10J4P0C629 311 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 S100A11P31949 105 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 LINC01556Q5JQF7 62 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 Q6AWC8 147 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 PCNPQ8WW12 178 aaKnown RBP7.9□□□□□ -1.14
BRCA1-225ENST00000586385 TXNDC17Q9BRA2 123 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 AAMDCQ9H7C9 122 aa7.9□□□□□ -1.14
BRCA1-225ENST00000586385 IL7P13232 177 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 INPP1P49441 399 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 KRTAP10-4P60372 401 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-225ENST00000586385 RAB32Q13637 225 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 ZNF846Q147U1 533 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 THAP6Q8TBB0 222 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 C2orf50Q96LR7 162 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 SPXQ9BT56 116 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 OR51M1Q9H341 326 aa7.89□□□□□ -1.15
BRCA1-225ENST00000586385 GPN1Q9HCN4 374 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-225ENST00000586385 LRP1Q07954 4544 aaKnown RBP7.89□□□□□ -1.15
BRCA1-225ENST00000586385 IGHV3-16A0A0C4DH30 117 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 C5orf51A6NDU8 294 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 C9JCJ5 164 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 GNRH2O43555 120 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 PSCAO43653 123 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 C1QBP02746 253 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 GATA1P15976 413 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-225ENST00000586385 S100A10P60903 97 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 TDRG1Q3Y452 100 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 Q8N3U1 123 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 SLC25A31Q9H0C2 315 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 Q9HAA7 133 aa7.88□□□□□ -1.15
BRCA1-225ENST00000586385 HBG1P69891 147 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 HBG2P69892 147 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 NHLH2Q02577 135 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 ATP6V1FQ16864 119 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 OR4C5Q8NGB2 326 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 PAXXQ9BUH6 204 aa7.87□□□□□ -1.15
BRCA1-225ENST00000586385 TRGV11A0A075B6L2 103 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 TRAV6A0A075B6T7 132 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 CENPXA8MT69 81 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 M0R2P5 195 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 IGHV3-30P01768 117 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 IGHV3-33P01772 117 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 TCRBP04435 133 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 IGHV3-30-3P0DP02 117 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 IGHV3-30-5P0DP03 117 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 RANP62826 216 aaKnown RBP7.86□□□□□ -1.15
BRCA1-225ENST00000586385 CNPY1Q3B7I2 92 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 DPPA3Q6W0C5 159 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 STX12Q86Y82 276 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 NHLRC2Q8NBF2 726 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 TVP23CQ96ET8 276 aa7.86□□□□□ -1.15
BRCA1-225ENST00000586385 CCDC160A6NGH7 325 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 LYRM1O43325 122 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
BRCA1-225ENST00000586385 TYMSP04818 313 aa7.85□□□□□ -1.15
BRCA1-225ENST00000586385 PVALBP20472 110 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms