RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SH2D1AO60880 128 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 IGLV2-11P01706 119 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 IGLV2-8P01709 118 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ORM1P02763 201 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 MT-ND6P03923 174 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 S100A6P06703 90 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 PFN1P07737 140 aaKnown RBP4.66□□□□□ -1.66
LIG3-206ENST00000586058 RAB5AP20339 215 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 EDN2P20800 178 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 RAB4BP61018 213 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ERCC8Q13216 396 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ELOBQ15370 118 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 DEFB114Q30KQ6 69 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
LIG3-206ENST00000586058 ATP5L2Q7Z4Y8 100 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 STHQ8IWL8 128 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 TSKUQ8WUA8 353 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ZC2HC1AQ96GY0 325 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 C8orf49Q96NF6 230 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 CLUHP3Q96NS8 147 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ODF3Q96PU9 254 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 CITED1Q99966 193 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 VGLL1Q99990 258 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 SELENOKQ9Y6D0 94 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 V9GYV3 84 aa4.66□□□□□ -1.66
LIG3-206ENST00000586058 ZNF469Q96JG9 3925 aaPredicted RBP4.65□□□□□ -1.66
LIG3-206ENST00000586058 BAHCC1Q9P281 2608 aa4.65□□□□□ -1.66
LIG3-206ENST00000586058 ACANP16112 2415 aa4.65□□□□□ -1.66
LIG3-206ENST00000586058 A0A1B0GW15 77 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 IZUMO1RA6ND01 250 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 PRAC2D3DTV9 90 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 HLA-DQA1P01909 254 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 AMBPP02760 352 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 S100A4P26447 101 aaKnown RBP4.65□□□□□ -1.67
LIG3-206ENST00000586058 CDKN1BP46527 198 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 TCL1AP56279 114 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 DEFB131AP59861 70 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 FAM159AQ6UWV7 190 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 SMIM15Q7Z3B0 74 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 FRZBQ92765 325 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 KCNS1Q96KK3 526 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 C20orf173Q96LM9 149 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 TPPP3Q9BW30 176 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 MAP6D1Q9H9H5 199 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 NAGKQ9UJ70 344 aa4.65□□□□□ -1.67
LIG3-206ENST00000586058 MAP1AP78559 2803 aaPredicted RBP4.64□□□□□ -1.67
LIG3-206ENST00000586058 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 TGIF2-C20orf24A0A0A6YYL0 155 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 A0A0J9YX75 114 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 HIGD1CA8MV81 97 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 INSP01308 110 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 IGLV1-51P01701 117 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 ZNF705DP0CH99 300 aaPredicted RBP4.64□□□□□ -1.67
LIG3-206ENST00000586058 ZNF705BP0CI00 300 aaPredicted RBP4.64□□□□□ -1.67
LIG3-206ENST00000586058 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 RIGQ13278 110 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 ACTL10Q5JWF8 245 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 HIST2H2BDQ6DRA6 164 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 COX8CQ7Z4L0 72 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 LINC00482Q8N8I6 264 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 NEU1Q99519 415 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 C1QTNF4Q9BXJ3 329 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 SRD5A3Q9H8P0 318 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 TRAPPC1Q9Y5R8 145 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
LIG3-206ENST00000586058 TMSB15BA0A087X1C1 80 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 A0A1B0GUT8 65 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 C7orf71A4D174 169 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 COLCA2A8K830 154 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 SNURFLB1AK76 121 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 F2Z2F3 143 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 F6UB75 175 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 CA1P00915 261 aaPredicted RBP4.63□□□□□ -1.67
LIG3-206ENST00000586058 IGKV3-20P01619 116 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 TYMSP04818 313 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 CXCL1P09341 107 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 PRB4P10163 310 aaPredicted RBP4.63□□□□□ -1.67
LIG3-206ENST00000586058 CRISP2P16562 243 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 ASIPP42127 132 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 HBBP68871 147 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 KRTAP24-1Q3LI83 254 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 MRPL54Q6P161 138 aaKnown RBP4.63□□□□□ -1.67
LIG3-206ENST00000586058 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 FER1L6-AS1Q8NA97 138 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 FAM110AQ9BQ89 295 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 ZNF747Q9BV97 191 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 WNK1Q9H4A3 2382 aa4.63□□□□□ -1.67
LIG3-206ENST00000586058 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
LIG3-206ENST00000586058 TRGV11A0A075B6L2 103 aa4.62□□□□□ -1.67
LIG3-206ENST00000586058 SPINK4O60575 86 aa4.62□□□□□ -1.67
LIG3-206ENST00000586058 RNASE4P34096 147 aaKnown RBP4.62□□□□□ -1.67
LIG3-206ENST00000586058 CACNG7P62955 275 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms