RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	TRAV9-1	A0A075B6T8	112 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	DUSP14	O95147	198 aa	Known RBP	13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	FOXI2	Q6ZQN5	318 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	YPEL4	Q96NS1	127 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	ZMAT5	Q9UDW3	170 aa	Known RBP	13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	COLCA2	A8K830	154 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	PFN1	P07737	140 aa	Known RBP	13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	CMC4	P56277	68 aa	Predicted RBP	13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	KRTAP10-11	P60412	298 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	RPL19	P84098	196 aa	Known RBP	13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	ODF3	Q96PU9	254 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	ASCL2	Q99929	193 aa		13.28	□□□□□ -0.28
RBFOX1-222	ENST00000585867	TRBV24-1	A0A075B6N3	115 aa		13.27	□□□□□ -0.29
RBFOX1-222	ENST00000585867		A8MWL6	223 aa		13.27	□□□□□ -0.29
RBFOX1-222	ENST00000585867	BEAN1	Q3B7T3	259 aa		13.27	□□□□□ -0.29
RBFOX1-222	ENST00000585867	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.27	□□□□□ -0.29
RBFOX1-222	ENST00000585867		A0A0J9YX75	114 aa		13.26	□□□□□ -0.29
RBFOX1-222	ENST00000585867	ZNF705D	P0CH99	300 aa	Predicted RBP	13.26	□□□□□ -0.29
RBFOX1-222	ENST00000585867	ZNF705B	P0CI00	300 aa	Predicted RBP	13.26	□□□□□ -0.29
RBFOX1-222	ENST00000585867	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.26	□□□□□ -0.29
RBFOX1-222	ENST00000585867	SAV1	Q9H4B6	383 aa	Predicted RBP	13.26	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FABP5P3	A8MUU1	101 aa		13.25	□□□□□ -0.29
RBFOX1-222	ENST00000585867		F6UB75	175 aa		13.25	□□□□□ -0.29
RBFOX1-222	ENST00000585867	SH2D1A	O60880	128 aa		13.25	□□□□□ -0.29
RBFOX1-222	ENST00000585867	TSKU	Q8WUA8	353 aa		13.25	□□□□□ -0.29
RBFOX1-222	ENST00000585867		A0A1W2PPQ1	181 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	SMIM27	A0A1W2PRY6	76 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	XKRY2	A2RUG3	117 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	CRISP2	P16562	243 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	DEFB131A	P59861	70 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	KPRP	Q5T749	579 aa	Predicted RBP	13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FAM19A4	Q96LR4	140 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	PYGO2	Q9BRQ0	406 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	GFRA4	Q9GZZ7	299 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	MAP6D1	Q9H9H5	199 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FAM231B	A6NCW3	169 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	RAB5A	P20339	215 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	LEP	P41159	167 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	CRIP1	P50238	77 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	OR2D3	Q8NGH3	330 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FAM210B	Q96KR6	192 aa		13.24	□□□□□ -0.29
RBFOX1-222	ENST00000585867	MGAM2	Q2M2H8	2515 aa		13.23	□□□□□ -0.29
RBFOX1-222	ENST00000585867	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.23	□□□□□ -0.29
RBFOX1-222	ENST00000585867	DEFB1	P60022	68 aa		13.23	□□□□□ -0.29
RBFOX1-222	ENST00000585867	RPS20	P60866	119 aa	Known RBP	13.23	□□□□□ -0.29
RBFOX1-222	ENST00000585867	TMEM189	A5PLL7	270 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	CXCL1	P09341	107 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	TSPO	P30536	169 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FAM3B	P58499	235 aa	Predicted RBP	13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	APRG1	Q8IVJ8	170 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	FAM110A	Q9BQ89	295 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	NAT8B	Q9UHF3	227 aa		13.22	□□□□□ -0.29
RBFOX1-222	ENST00000585867	GPX1	P07203	203 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	CD7	P09564	240 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	HLA-DRB4	P13762	266 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	ZNF80	P51504	273 aa	Predicted RBP	13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	GDF5OS	Q5U4N7	250 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867		Q6AWC8	147 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	ZFAND2A	Q8N6M9	145 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	HLA-DRB4	X5D2U9	266 aa		13.21	□□□□□ -0.29
RBFOX1-222	ENST00000585867	CMYA5	Q8N3K9	4069 aa		13.21	□□□□□ -0.3
RBFOX1-222	ENST00000585867	TRAV21	A0A0B4J279	112 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	OR11H12	B2RN74	326 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	CA1	P00915	261 aa	Predicted RBP	13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	TYMS	P04818	313 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	GTSCR1	Q86UQ5	136 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	SORL1	Q92673	2214 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867		A8MTW9	85 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	PRB2	P02812	416 aa	Predicted RBP	13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	LINC01559	Q495D7	138 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	ACTL10	Q5JWF8	245 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	NEU1	Q99519	415 aa		13.2	□□□□□ -0.3
RBFOX1-222	ENST00000585867	KLLN	B2CW77	178 aa		13.19	□□□□□ -0.3
RBFOX1-222	ENST00000585867	TCL1A	P56279	114 aa		13.19	□□□□□ -0.3
RBFOX1-222	ENST00000585867	CLUHP3	Q96NS8	147 aa		13.19	□□□□□ -0.3
RBFOX1-222	ENST00000585867	KNCN	A6PVL3	124 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	HIGD1C	A8MV81	97 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867		H3BMM0	161 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	ORM1	P02763	201 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	RPS10	P46783	165 aa	Known RBP	13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	ODF3L2	Q3SX64	289 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	COX19	Q49B96	90 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867		Q8N1Y9	231 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	SRD5A3	Q9H8P0	318 aa		13.18	□□□□□ -0.3
RBFOX1-222	ENST00000585867	CDKN1B	P46527	198 aa		13.17	□□□□□ -0.3
RBFOX1-222	ENST00000585867	NUP35	Q8NFH5	326 aa		13.17	□□□□□ -0.3
RBFOX1-222	ENST00000585867	RNASE4	P34096	147 aa	Known RBP	13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	FOXA3	P55318	350 aa	Predicted RBP	13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	PRR9	Q5T870	116 aa		13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	RASL11A	Q6T310	242 aa		13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	ATP5L2	Q7Z4Y8	100 aa		13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	C19orf73	Q9NVV2	129 aa		13.16	□□□□□ -0.3
RBFOX1-222	ENST00000585867	C7orf71	A4D174	169 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867		J3KRW8	73 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	IGKV3-20	P01619	116 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	STH	Q8IWL8	128 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	GTSF1	Q8WW33	167 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	BORCS7	Q96B45	105 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	WDR73	Q6P4I2	378 aa		13.15	□□□□□ -0.3
RBFOX1-222	ENST00000585867	AMTN	Q6UX39	209 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms