RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
VMP1-202ENST00000585847 IL36BQ9NZH7 164 aa9.42□□□□□ -0.9
VMP1-202ENST00000585847 TRAV8-1A0A0A6YYK1 113 aa9.41□□□□□ -0.9
VMP1-202ENST00000585847 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
VMP1-202ENST00000585847 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
VMP1-202ENST00000585847 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
VMP1-202ENST00000585847 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
VMP1-202ENST00000585847 TSKUQ8WUA8 353 aa9.41□□□□□ -0.9
VMP1-202ENST00000585847 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
VMP1-202ENST00000585847 A0A0J9YX75 114 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 A0A1B0GW15 77 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 A8MTW9 85 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 FABP5P3A8MUU1 101 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 ZNF705GA8MUZ8 300 aaPredicted RBP9.4□□□□□ -0.9
VMP1-202ENST00000585847 AMBPP02760 352 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
VMP1-202ENST00000585847 ATP5L2Q7Z4Y8 100 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 CBLN2Q8IUK8 224 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 MRAPQ8TCY5 172 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 FAM19A4Q96LR4 140 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 VGLL1Q99990 258 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 PYGO2Q9BRQ0 406 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 NAT8BQ9UHF3 227 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 V9GYV3 84 aa9.4□□□□□ -0.9
VMP1-202ENST00000585847 TRAV21A0A0B4J279 112 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 A0A1W2PPQ1 181 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
VMP1-202ENST00000585847 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 TYMSP04818 313 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 S100A8P05109 93 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 ZNF688P0C7X2 276 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 HLA-DRB4P13762 266 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 FAM3BP58499 235 aaPredicted RBP9.39□□□□□ -0.91
VMP1-202ENST00000585847 TMEM88Q6PEY1 159 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 C20orf173Q96LM9 149 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
VMP1-202ENST00000585847 HLA-DRB4X5D2U9 266 aa9.39□□□□□ -0.91
VMP1-202ENST00000585847 IGKV3-7A0A075B6H7 116 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 SMIM27A0A1W2PRY6 76 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 HLA-DMBP28068 263 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
VMP1-202ENST00000585847 ELOBQ15370 118 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 C20orf144Q9BQM9 153 aa9.38□□□□□ -0.91
VMP1-202ENST00000585847 KLLNB2CW77 178 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 OR11H12B2RN74 326 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 SCO1O75880 301 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 MT-ND6P03923 174 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 TFPI2P48307 235 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
VMP1-202ENST00000585847 OR5I1Q13606 314 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 WDR73Q6P4I2 378 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 WFDC3Q8IUB2 231 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 Q8N1Y9 231 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 NHLRC2Q8NBF2 726 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 RNASE7Q9H1E1 156 aaKnown RBP9.37□□□□□ -0.91
VMP1-202ENST00000585847 MAP6D1Q9H9H5 199 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 C19orf73Q9NVV2 129 aa9.37□□□□□ -0.91
VMP1-202ENST00000585847 AURKAIP1Q9NWT8 199 aaPredicted RBP9.37□□□□□ -0.91
VMP1-202ENST00000585847 COLCA2A8K830 154 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 CD7P09564 240 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 RAB5AP20339 215 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 Q8TAT8 98 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 KCNS1Q96KK3 526 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
VMP1-202ENST00000585847 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 K7EIL1 84 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 SH2D1AO60880 128 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 GPX1P07203 203 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 MED14OSP0DP75 135 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 CDKN1BP46527 198 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
VMP1-202ENST00000585847 F2Z2F3 143 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 DEFB131AP59861 70 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 ERCC8Q13216 396 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 GTSCR1Q86UQ5 136 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 NEU1Q99519 415 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
VMP1-202ENST00000585847 H3BMM0 161 aa9.33□□□□□ -0.92
VMP1-202ENST00000585847 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
VMP1-202ENST00000585847 TDRG1Q3Y452 100 aa9.33□□□□□ -0.92
VMP1-202ENST00000585847 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
VMP1-202ENST00000585847 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
VMP1-202ENST00000585847 C1QTNF4Q9BXJ3 329 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms