RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 LGALS1P09382 135 aaKnown RBP8.58□□□□□ -1.04
LIG3-204ENST00000585740 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 RAB4AP20338 218 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 CTRLP40313 264 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 ID1P41134 155 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 AMTP48728 403 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 ZNF493Q6ZR52 646 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 IL17RELQ6ZVW7 336 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 REC114Q7Z4M0 266 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 OR10J6PQ8NGY7 276 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 UBE2E2Q96LR5 201 aa8.58□□□□□ -1.04
LIG3-204ENST00000585740 SSBP4Q9BWG4 385 aaPredicted RBP8.58□□□□□ -1.04
LIG3-204ENST00000585740 FN1P02751 2386 aaKnown RBP8.57□□□□□ -1.04
LIG3-204ENST00000585740 TRBV7-9A0A0J9YWB2 115 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 F2Z2F3 143 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 LGALS9O00182 355 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 ORM1P02763 201 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 ZNF80P51504 273 aaPredicted RBP8.57□□□□□ -1.04
LIG3-204ENST00000585740 PKIAP61925 76 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 LYZL1Q6UWQ5 148 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 WFDC11Q8NEX6 87 aa8.57□□□□□ -1.04
LIG3-204ENST00000585740 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
LIG3-204ENST00000585740 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 HSBP1O75506 76 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 SCGB1D1O95968 90 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 PMCHP20382 165 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 RPL11P62913 178 aaKnown RBP8.56□□□□□ -1.04
LIG3-204ENST00000585740 TM4SF20Q53R12 229 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 TPPP3Q9BW30 176 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 NAGKQ9UJ70 344 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 COL6A5A8TX70 2615 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 STAB1Q9NY15 2570 aa8.56□□□□□ -1.04
LIG3-204ENST00000585740 TMSB15BA0A087X1C1 80 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
LIG3-204ENST00000585740 SCGB2A2Q13296 93 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 Q6ZWC4 215 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 C20orf173Q96LM9 149 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 RCHY1Q96PM5 261 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 CNFNQ9BYD5 112 aa8.55□□□□□ -1.04
LIG3-204ENST00000585740 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
LIG3-204ENST00000585740 PRB4P10163 310 aaPredicted RBP8.54□□□□□ -1.04
LIG3-204ENST00000585740 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
LIG3-204ENST00000585740 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
LIG3-204ENST00000585740 NBEAL1Q6ZS30 2694 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 M0QZ24 198 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 CD5LO43866 347 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 LY6G6DO95868 133 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 ZNF705DP0CH99 300 aaPredicted RBP8.53□□□□□ -1.04
LIG3-204ENST00000585740 ZNF705BP0CI00 300 aaPredicted RBP8.53□□□□□ -1.04
LIG3-204ENST00000585740 CACNG7P62955 275 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 NIT1Q86X76 327 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 OR8A1Q8NGG7 326 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 TMEM191AQ9H0A3 160 aa8.53□□□□□ -1.04
LIG3-204ENST00000585740 TMEM213A2RRL7 107 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 M0R2Z0 102 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 OR5AL1P0C617 328 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 NTF3P20783 257 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 TWIST1Q15672 202 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 SMIM15Q7Z3B0 74 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 WFDC12Q8WWY7 111 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 U3KQK5 164 aa8.52□□□□□ -1.05
LIG3-204ENST00000585740 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 A0A087WW49 117 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 PPBPP02775 128 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 LINC00614P0C842 121 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 MED14OSP0DP75 135 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 KRTDAPP60985 99 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 APRG1Q8IVJ8 170 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 KLHDC1Q8N7A1 406 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 FAM19A4Q96LR4 140 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 ODF3Q96PU9 254 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 ATRQ13535 2644 aa8.51□□□□□ -1.05
LIG3-204ENST00000585740 IGKV3D-20A0A0C4DH25 116 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 SNAI2O43623 268 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
LIG3-204ENST00000585740 SNRPD3P62318 126 aaKnown RBP8.5□□□□□ -1.05
LIG3-204ENST00000585740 FA2HQ7L5A8 372 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 ZFAND2AQ8N6M9 145 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 PRELID3AQ96N28 172 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 LAMTOR2Q9Y2Q5 125 aa8.5□□□□□ -1.05
LIG3-204ENST00000585740 IGHV4-4A0A075B6R2 117 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 LINC01619G3V211 115 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 K7EQG2 157 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 LEPP41159 167 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
LIG3-204ENST00000585740 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
LIG3-204ENST00000585740 ZNF575Q86XF7 245 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms