RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 PEX7O00628 323 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 ZNF324O75467 553 aaPredicted RBP15.37■□□□□ 0.05
RETREG3-202ENST00000585726 SPART-AS1P0CW21 52 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 FAM222AQ5U5X8 452 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 TVP23CQ96ET8 276 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 PYGO2Q9BRQ0 406 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 TREM1Q9NP99 234 aa15.37■□□□□ 0.05
RETREG3-202ENST00000585726 TEX46H3BTG2 121 aa15.36■□□□□ 0.05
RETREG3-202ENST00000585726 FLI1Q01543 452 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-202ENST00000585726 PHLDA1Q8WV24 401 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-202ENST00000585726 C16orf74Q96GX8 76 aa15.36■□□□□ 0.05
RETREG3-202ENST00000585726 NDFIP1Q9BT67 221 aa15.36■□□□□ 0.05
RETREG3-202ENST00000585726 GNG13Q9P2W3 67 aa15.36■□□□□ 0.05
RETREG3-202ENST00000585726 DKK2Q9UBU2 259 aa15.36■□□□□ 0.05
RETREG3-202ENST00000585726 RGS13O14921 159 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 IGLV2-11P01706 119 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 PPT1P50897 306 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 TMEM75Q8N9X5 138 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 HIST1H2BAQ96A08 127 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 C8orf49Q96NF6 230 aa15.35■□□□□ 0.05
RETREG3-202ENST00000585726 TRAV1-1A0A0B4J248 108 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 CBY3A6NI87 242 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 C12orf74Q32Q52 190 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 MUC21Q5SSG8 566 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 Q6ZTC4 211 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 TMEM263Q8WUH6 116 aaKnown RBP15.34■□□□□ 0.05
RETREG3-202ENST00000585726 ARL2-SNX15V9GYD0 113 aa15.34■□□□□ 0.05
RETREG3-202ENST00000585726 PLAC8L1A1L4L8 177 aa15.33■□□□□ 0.04
RETREG3-202ENST00000585726 ZNF493Q6ZR52 646 aa15.33■□□□□ 0.04
RETREG3-202ENST00000585726 RNASE8Q8TDE3 154 aaKnown RBP15.33■□□□□ 0.04
RETREG3-202ENST00000585726 IGHV1OR15-1A0A075B7D0 117 aa15.32■□□□□ 0.04
RETREG3-202ENST00000585726 CEMP1Q6PRD7 247 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-202ENST00000585726 EIF4E3Q8N5X7 224 aaKnown RBP15.32■□□□□ 0.04
RETREG3-202ENST00000585726 MANBALQ9NQG1 85 aa15.32■□□□□ 0.04
RETREG3-202ENST00000585726 NAGKQ9UJ70 344 aa15.32■□□□□ 0.04
RETREG3-202ENST00000585726 NUPR2A6NF83 97 aa15.31■□□□□ 0.04
RETREG3-202ENST00000585726 FBLL1A6NHQ2 334 aaKnown RBP15.31■□□□□ 0.04
RETREG3-202ENST00000585726 C11orf94C9JXX5 98 aa15.31■□□□□ 0.04
RETREG3-202ENST00000585726 Q6AWC8 147 aa15.31■□□□□ 0.04
RETREG3-202ENST00000585726 NOP10Q9NPE3 64 aaKnown RBP15.31■□□□□ 0.04
RETREG3-202ENST00000585726 TP53TG3Q9ULZ0 132 aa15.31■□□□□ 0.04
RETREG3-202ENST00000585726 TIMM8BQ9Y5J9 83 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-202ENST00000585726 TEX48A0A1B0GUV7 120 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 SCO2A0A1W2PP80 73 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 SNURFLB1AK76 121 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 AKR1C3P42330 323 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 DAD1P61803 113 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 UBE2G1P62253 170 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 SAPCD1Q5SSQ6 148 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 LINC00467Q9BRT7 94 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 TCEAL7Q9BRU2 100 aa15.3■□□□□ 0.04
RETREG3-202ENST00000585726 TRAV21A0A0B4J279 112 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 GCGP01275 180 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 DEFB130BP0DP73 79 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 DEFB130AP0DP74 79 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 FAM159AQ6UWV7 190 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 Q86TA4 180 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 GSN-AS1Q9NRJ2 163 aa15.29■□□□□ 0.04
RETREG3-202ENST00000585726 LYRM9A8MSI8 78 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 IFNA1P01562 189 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 HTN3P15516 51 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 ZNF80P51504 273 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-202ENST00000585726 BLOC1S1P78537 153 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 ANXA2RQ3ZCQ2 193 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 SMUG1Q53HV7 270 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 ZNF680Q8NEM1 530 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 FMC1Q96HJ9 113 aa15.28■□□□□ 0.04
RETREG3-202ENST00000585726 KLK5Q9Y337 293 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-202ENST00000585726 TRAV10A0A0B4J240 114 aa15.27■□□□□ 0.04
RETREG3-202ENST00000585726 DEFB131BA0A096LNP1 70 aa15.26■□□□□ 0.03
RETREG3-202ENST00000585726 TMEM183BQ1AE95 376 aa15.26■□□□□ 0.03
RETREG3-202ENST00000585726 C11orf72Q8NBR9 251 aa15.26■□□□□ 0.03
RETREG3-202ENST00000585726 KLF12Q9Y4X4 402 aa15.26■□□□□ 0.03
RETREG3-202ENST00000585726 TMEM183AQ8IXX5 376 aa15.25■□□□□ 0.03
RETREG3-202ENST00000585726 C2CD4CQ8TF44 421 aa15.25■□□□□ 0.03
RETREG3-202ENST00000585726 STARD9Q9P2P6 4700 aa15.24■□□□□ 0.03
RETREG3-202ENST00000585726 IGLL5B9A064 214 aa15.24■□□□□ 0.03
RETREG3-202ENST00000585726 ZFP30Q9Y2G7 519 aa15.24■□□□□ 0.03
RETREG3-202ENST00000585726 GAGE12BA1L429 117 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 GNRH2O43555 120 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 GAGE7O76087 117 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 PFN1P07737 140 aaKnown RBP15.23■□□□□ 0.03
RETREG3-202ENST00000585726 GAGE12FP0CL80 117 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 GAGE12GP0CL81 117 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 GAGE12IP0CL82 117 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 BCL2P10415 239 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 ZNF415Q09FC8 603 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 NHLRC2Q8NBF2 726 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 MDFICQ9P1T7 246 aa15.23■□□□□ 0.03
RETREG3-202ENST00000585726 CSMD3Q7Z407 3707 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 TRGV11A0A075B6L2 103 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 LTAP01374 205 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 S100A9P06702 114 aaKnown RBP15.22■□□□□ 0.03
RETREG3-202ENST00000585726 TCL1AP56279 114 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 MEF2BQ02080 365 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-202ENST00000585726 IBA57Q5T440 356 aaKnown RBP15.22■□□□□ 0.03
RETREG3-202ENST00000585726 ZC2HC1AQ96GY0 325 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 TXNDC17Q9BRA2 123 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 SDF2L1Q9HCN8 221 aa15.22■□□□□ 0.03
RETREG3-202ENST00000585726 C11orf21Q9P2W6 132 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms