RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 TREM1Q9NP99 234 aa10.15□□□□□ -0.78
MKS1-213ENST00000585134 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 CBY3A6NI87 242 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 NMBP08949 121 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 AKR1C3P42330 323 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 PPT1P50897 306 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 CCL20P78556 96 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 FLI1Q01543 452 aaPredicted RBP10.14□□□□□ -0.79
MKS1-213ENST00000585134 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 LINC00479Q96M42 142 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 C8orf49Q96NF6 230 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 PYGO2Q9BRQ0 406 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 NKX6-2Q9C056 277 aaPredicted RBP10.14□□□□□ -0.79
MKS1-213ENST00000585134 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 ARL2-SNX15V9GYD0 113 aa10.14□□□□□ -0.79
MKS1-213ENST00000585134 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 SPART-AS1P0CW21 52 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 Q6ZTC4 211 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 Q86TA4 180 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 TMEM263Q8WUH6 116 aaKnown RBP10.13□□□□□ -0.79
MKS1-213ENST00000585134 PHLDA1Q8WV24 401 aaPredicted RBP10.13□□□□□ -0.79
MKS1-213ENST00000585134 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
MKS1-213ENST00000585134 C11orf94C9JXX5 98 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 ZNF324O75467 553 aaPredicted RBP10.12□□□□□ -0.79
MKS1-213ENST00000585134 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 UBE2G1P62253 170 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 C12orf74Q32Q52 190 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 EIF4E3Q8N5X7 224 aaKnown RBP10.12□□□□□ -0.79
MKS1-213ENST00000585134 RNASE8Q8TDE3 154 aaKnown RBP10.12□□□□□ -0.79
MKS1-213ENST00000585134 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 DKK2Q9UBU2 259 aa10.12□□□□□ -0.79
MKS1-213ENST00000585134 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 TEX48A0A1B0GUV7 120 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 PLAC8L1A1L4L8 177 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 IFNA1P01562 189 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
MKS1-213ENST00000585134 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
MKS1-213ENST00000585134 TRAV21A0A0B4J279 112 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 FBLL1A6NHQ2 334 aaKnown RBP10.1□□□□□ -0.79
MKS1-213ENST00000585134 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 GCGP01275 180 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 HTN3P15516 51 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 DAD1P61803 113 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 SMUG1Q53HV7 270 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 Q6AWC8 147 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
MKS1-213ENST00000585134 FMC1Q96HJ9 113 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 TCEAL7Q9BRU2 100 aa10.1□□□□□ -0.79
MKS1-213ENST00000585134 LYRM9A8MSI8 78 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 ZNF80P51504 273 aaPredicted RBP10.09□□□□□ -0.79
MKS1-213ENST00000585134 BLOC1S1P78537 153 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 ZNF680Q8NEM1 530 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
MKS1-213ENST00000585134 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
MKS1-213ENST00000585134 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 BCL2P10415 239 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 ZNF415Q09FC8 603 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 TMEM183BQ1AE95 376 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 TMEM183AQ8IXX5 376 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 LINC00467Q9BRT7 94 aa10.08□□□□□ -0.8
MKS1-213ENST00000585134 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
MKS1-213ENST00000585134 DEFB131BA0A096LNP1 70 aa10.07□□□□□ -0.8
MKS1-213ENST00000585134 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
MKS1-213ENST00000585134 C11orf72Q8NBR9 251 aa10.07□□□□□ -0.8
MKS1-213ENST00000585134 C2CD4CQ8TF44 421 aa10.07□□□□□ -0.8
MKS1-213ENST00000585134 PCNPQ8WW12 178 aaKnown RBP10.07□□□□□ -0.8
MKS1-213ENST00000585134 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
MKS1-213ENST00000585134 TRGV11A0A075B6L2 103 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 GAGE12BA1L429 117 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 GAGE7O76087 117 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 GAGE12FP0CL80 117 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 GAGE12GP0CL81 117 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 GAGE12IP0CL82 117 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 TCL1AP56279 114 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
MKS1-213ENST00000585134 MRPL16Q9NX20 251 aaKnown RBP10.06□□□□□ -0.8
MKS1-213ENST00000585134 TRGV1A0A0A0MS02 117 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 IGLL5B9A064 214 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 TYMSP04818 313 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 PFN1P07737 140 aaKnown RBP10.05□□□□□ -0.8
MKS1-213ENST00000585134 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
MKS1-213ENST00000585134 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 DERL1Q9BUN8 251 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 C11orf21Q9P2W6 132 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 VAX2Q9UIW0 290 aa10.05□□□□□ -0.8
MKS1-213ENST00000585134 ZFP30Q9Y2G7 519 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms