RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 Q8N9W7 124 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 FAM110DQ8TAY7 271 aaPredicted RBP9.33□□□□□ -0.92
ERBB2-218ENST00000584450 TMEM158Q8WZ71 300 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 JMJD8Q96S16 334 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 IGLV11-55A0A075B6I3 123 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 PDE6HQ13956 83 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 DGAT2L7PQ6IED9 249 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
ERBB2-218ENST00000584450 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 DMDP11532 3685 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 KALRNO60229 2985 aa9.33□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV4-38-2P0DP08 117 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 C19orf84I3L1E1 186 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 FOXE3Q13461 319 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 A0A087WWL8 130 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
ERBB2-218ENST00000584450 SP5Q6BEB4 398 aaPredicted RBP9.32□□□□□ -0.92
ERBB2-218ENST00000584450 AGPAT4-IT1Q9H0P7 198 aa9.32□□□□□ -0.92
ERBB2-218ENST00000584450 CT83Q5H943 113 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 TTC9CQ8N5M4 171 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 OR1N2Q8NGR9 330 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 BEX4Q9NWD9 120 aaPredicted RBP9.31□□□□□ -0.92
ERBB2-218ENST00000584450 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 CENPVL3A0A0U1RRI6 287 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 NEGR1Q7Z3B1 354 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
ERBB2-218ENST00000584450 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.3□□□□□ -0.92
ERBB2-218ENST00000584450 PAX1P15863 534 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 SYNJ2BPP57105 145 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
ERBB2-218ENST00000584450 ITLN2Q8WWU7 325 aaPredicted RBP9.3□□□□□ -0.92
ERBB2-218ENST00000584450 SMIM12Q96EX1 92 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
ERBB2-218ENST00000584450 OR11H12B2RN74 326 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 MSMBP08118 114 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 ZC2HC1BQ5TFG8 222 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 OR11H1Q8NG94 326 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 OR11H2Q8NH07 326 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV4-30-2A0A087WSY4 118 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 PSMB11A5LHX3 300 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 B4DSR2 109 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 PRSS2P07478 247 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 KIR2DL4Q99706 377 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
ERBB2-218ENST00000584450 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 TACC2O95359 2948 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 TRAV12-2A0A075B6T6 113 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 VWC2LB2RUY7 222 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 INS-IGF2F8WCM5 200 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 PPBPP02775 128 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 PLP1P60201 277 aa9.29□□□□□ -0.92
ERBB2-218ENST00000584450 IGHV3-64A0A075B6Q5 118 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 FAM231BA6NCW3 169 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 NPBQ8NG41 125 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 CFHR4Q92496 578 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 ATP5LO75964 103 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 TRBV12-3P01733 135 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 LOXL1Q08397 574 aaPredicted RBP9.28□□□□□ -0.92
ERBB2-218ENST00000584450 CD300EQ496F6 205 aaPredicted RBP9.28□□□□□ -0.92
ERBB2-218ENST00000584450 FABP2P12104 132 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
ERBB2-218ENST00000584450 LINC00310P59036 64 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
ERBB2-218ENST00000584450 DOPEY1Q5JWR5 2465 aa9.27□□□□□ -0.92
ERBB2-218ENST00000584450 OR2K2Q8NGT1 345 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 DUX3Q96PT4 197 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 APOMO95445 188 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 CRYGBP07316 175 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 C9orf139Q6ZV77 190 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 PEF1Q9UBV8 284 aaKnown RBP9.27□□□□□ -0.93
ERBB2-218ENST00000584450 A0A1W2PPR1 153 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 C19orf71A6NCJ1 209 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 BUB3O43684 328 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 SRSF1Q07955 248 aaKnown RBP eCLIP9.27□□□□□ -0.93
ERBB2-218ENST00000584450 MBD6Q96DN6 1003 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 MLST8Q9BVC4 326 aa9.27□□□□□ -0.93
ERBB2-218ENST00000584450 DPM2O94777 84 aa9.26□□□□□ -0.93
ERBB2-218ENST00000584450 IGHV4-59P01825 116 aa9.26□□□□□ -0.93
ERBB2-218ENST00000584450 PCP4P48539 62 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms