RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	FXYD5	Q96DB9	178 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	PRADC1	Q9BSG0	188 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	ZNF257	Q9Y2Q1	563 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	LINC00312	Q9Y6C7	94 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TRBV20-1	A0A075B6N2	111 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	NDUFB3	O43676	98 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	LY96	Q9Y6Y9	160 aa		9.14	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TRAV9-1	A0A075B6T8	112 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FAM231B	A6NCW3	169 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	ZNF672	Q499Z4	452 aa	Predicted RBP	9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	PDPN	Q86YL7	162 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	C11orf45	Q8TAV5	145 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	MBD6	Q96DN6	1003 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	URB1-AS1	Q96HZ7	61 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	NDUFS7	O75251	213 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	NUDT3	O95989	172 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	IGLC6	P0CF74	106 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	LOX	P28300	417 aa	Predicted RBP	9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	SSX8	Q7RTT4	187 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	GTSF1	Q8WW33	167 aa		9.13	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	C19orf84	I3L1E1	186 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	IGLV2-23	P01705	113 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	LYZ	P61626	148 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	SYT8	Q8NBV8	401 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	C17orf77	Q96MU5	243 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TP53TG1	Q9Y2A0	90 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FNDC10	F2Z333	226 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	MRGPRG-AS1	Q2M3A8	158 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FBXL19-AS1	Q494R0	122 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	PRNT	Q86SH4	94 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	DEFB125	Q8N687	156 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TEX29	Q8N6K0	151 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TMSB15B	A0A087X1C1	80 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TCRBV4S1A1T	A0A5B7	111 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FAM231D	Q6ZW35	169 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	LINC00574	Q9H8X3	128 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	C1RL	Q9NZP8	487 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	EPDR1	Q9UM22	224 aa		9.12	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063		A0A1W2PPR1	153 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	COX7A1	P24310	79 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	MPV17L2	Q567V2	206 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	IGHV3OR16-8	A0A075B7F1	116 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	GOLT1A	Q6ZVE7	132 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TTC9C	Q8N5M4	171 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FBXL15	Q9H469	300 aa		9.11	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	IGHV2-26	A0A0B4J1V2	119 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	C2orf70	A6NJV1	201 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	NPFF	O15130	113 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	RBP4	P02753	201 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	KLF17	Q5JT82	389 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	ITLN2	Q8WWU7	325 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	WASHC3	Q9Y3C0	194 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063		P01737	135 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	NDUFV3	P56181	108 aa	Known RBP	9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	OR2K2	Q8NGT1	345 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	OSR1	Q8TAX0	266 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063		Q9H3A6	140 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	CCDC168	Q8NDH2	2452 aa		9.1	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063		A0A1B0GX51	115 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	FSTL3	O95633	263 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	SERTAD4-AS1	Q5TG53	156 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	BCL6B	Q8N143	479 aa	Predicted RBP	9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	TRAV9-2	A0A087WT02	112 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063		K7EP34	96 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	PPP1R27	Q86WC6	154 aa		9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	MRPL32	Q9BYC8	188 aa	Known RBP	9.09	□□□□□ -0.95
CDK5RAP3-231	ENST00000584063	IGHV1-24	A0A0C4DH33	117 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	LOC389332	A0A1B0GUA5	103 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	CCL24	O00175	119 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	HTR1D	P28221	377 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	LEP	P41159	167 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	KLHDC1	Q8N7A1	406 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	BBC3	Q96PG8	261 aa	Predicted RBP	9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	SIGLEC8	Q9NYZ4	499 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	CSPG4	Q6UVK1	2322 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	NAV2	Q8IVL1	2488 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	IGHV3-35	A0A0C4DH35	117 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	CHEK1	O14757	476 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	IGHV1-8	P0DP01	117 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	HBB	P68871	147 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063		Q6ZUT4	128 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	OR8B3	Q8NGG8	313 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	CCDC140	Q96MF4	163 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	RPP21	Q9H633	154 aa	Known RBP	9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	C7orf69	Q9H7B7	122 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	TLN2	Q9Y4G6	2542 aa		9.08	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063		M0R3E3	92 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	VPREB1	P12018	145 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	PLGLA	Q15195	96 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	TMEM167A	Q8TBQ9	72 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	TMEM70	Q9BUB7	260 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	LEPROTL1	O95214	131 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	IGHV3-23	P01764	117 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063		Q6AWC8	147 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	IGFL4	Q6B9Z1	124 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	GATD1	Q8NB37	220 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	SUB1	P53999	127 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	TMEM155	Q4W5P6	130 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	OR4F17	Q8NGA8	305 aa		9.07	□□□□□ -0.96
CDK5RAP3-231	ENST00000584063	SRSF12	Q8WXF0	261 aa	Known RBP	9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms