RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 PMVKQ15126 192 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 RSU1Q15404 277 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 GRK1Q15835 563 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 KLK9Q2XQG4 91 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 DEFB112Q30KQ8 113 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 KRTAP21-3Q3LHN1 58 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 MORN2Q502X0 79 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 RPL39P5Q59GN2 51 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 UBE2NLQ5JXB2 153 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 GLT8D1Q68CQ7 371 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 CLEC19AQ6UXS0 136 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 ZNF818PQ6ZRF7 136 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 TMEM136Q6ZRR5 245 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 ZNF833PQ6ZTB9 187 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 Q8N2B8 174 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 OR8B3Q8NGG8 313 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 OR4C13Q8NGP0 309 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 OR11L1Q8NGX0 322 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 RXFP4Q8TDU9 374 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 SMIM4Q8WVI0 70 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 ASB13Q8WXK3 278 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 MRPS24Q96EL2 167 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 FAM19A4Q96LR4 140 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 ZNF714Q96N38 554 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 OR8B2Q96RD0 313 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 CMSS1Q9BQ75 279 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 SUCNR1Q9BXA5 334 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 MRPL20Q9BYC9 149 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 SLC25A31Q9H0C2 315 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 TMEM133Q9H2Q1 129 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 Q9H521 79 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 C11orf1Q9H5F2 150 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 ABRACLQ9P1F3 81 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 RSL24D1Q9UHA3 163 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 GLS2Q9UI32 602 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 PRO0628Q9UI54 55 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 KLK9Q9UKQ9 250 aa1.44□□□□□ -2.18
VAPA-206ENST00000583475 C14orf166Q9Y224 244 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 NOP16Q9Y3C1 178 aaKnown RBP1.44□□□□□ -2.18
VAPA-206ENST00000583475 KMT2AQ03164 3969 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TGIF2-C20orf24A0A0A6YYL0 155 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TRAV3A0A0B4J244 114 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 IGHV1-3A0A0C4DH29 117 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TMEM30CPA0ZSE6 113 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 SMIM9A6NGZ8 99 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 H3BP45 60 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 BUB1B-PAK6H3BSN5 160 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 J3QRK9 145 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 NPFFO15130 113 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 PSPHP1O15172 72 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 NDUFA2O43678 99 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 YPEL1O60688 119 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 IGKV1-5P01602 117 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 IGHV3-11P01762 117 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 CD3DP04234 171 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 NFYAP23511 347 aaPredicted RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 CD24P25063 80 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 BLVRBP30043 206 aaPredicted RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 RAB13P51153 203 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 RPL23P62829 140 aaKnown RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 UBA52P62987 128 aaKnown RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 PPP3R1P63098 170 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 EDDM3AQ14507 147 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 LRRC75BQ2VPJ9 315 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TMEM97Q5BJF2 176 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 FAM162BQ5T6X4 162 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 C1orf195Q5TG92 126 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 SCGB1D4Q6XE38 83 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 SLC36A1Q7Z2H8 476 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 LYG2Q86SG7 212 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 PDZD9Q8IXQ8 264 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 DRAM1Q8N682 238 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 SIGLECL1Q8N7X8 197 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 C5orf56Q8N8D9 126 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 OR4C16Q8NGL9 310 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 OR10X1Q8NGY0 326 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 MRPL48Q96GC5 212 aaKnown RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 FMC1Q96HJ9 113 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 ABHD14BQ96IU4 210 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 YPEL2Q96QA6 119 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 NABP2Q9BQ15 211 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 HSPB9Q9BQS6 159 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TMEM243Q9BU79 118 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 C6orf62Q9GZU0 229 aaPredicted RBP1.43□□□□□ -2.18
VAPA-206ENST00000583475 CST11Q9H112 138 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 TAF9BQ9HBM6 251 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 IDI2-AS1Q9NZ38 188 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 DOK5Q9P104 306 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 COMMD3Q9UBI1 195 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 JPT1Q9UK76 154 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 SSR3Q9UNL2 185 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 FRAS1Q86XX4 4008 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 DNAH2Q9P225 4427 aa1.43□□□□□ -2.18
VAPA-206ENST00000583475 ALMS1Q8TCU4 4167 aa1.42□□□□□ -2.18
VAPA-206ENST00000583475 FAT2Q9NYQ8 4349 aa1.42□□□□□ -2.18
VAPA-206ENST00000583475 MEIKINA0A087WXM9 373 aa1.42□□□□□ -2.18
VAPA-206ENST00000583475 TEX50A0A1B0GTY4 177 aa1.42□□□□□ -2.18
VAPA-206ENST00000583475 LOC389332A0A1B0GUA5 103 aa1.42□□□□□ -2.18
VAPA-206ENST00000583475 LOC105371267A0A1B0GV96 52 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms