RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TMEM256Q8N2U0 113 aa8.49□□□□□ -1.05
TOP3A-215ENST00000583328 ZNF503Q96F45 646 aa8.49□□□□□ -1.05
TOP3A-215ENST00000583328 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
TOP3A-215ENST00000583328 ACTR3CQ9C0K3 210 aaPredicted RBP8.49□□□□□ -1.05
TOP3A-215ENST00000583328 MDFICQ9P1T7 246 aa8.49□□□□□ -1.05
TOP3A-215ENST00000583328 MRPS16Q9Y3D3 137 aaKnown RBP8.49□□□□□ -1.05
TOP3A-215ENST00000583328 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 BOLA2-SMG1P6H3BVE0 249 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 SLC17A3O00476 420 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
TOP3A-215ENST00000583328 STAG3L2P0CL84 134 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 STAG3L3P0CL85 134 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 UBE2L3P68036 154 aaKnown RBP8.48□□□□□ -1.05
TOP3A-215ENST00000583328 CDPF1Q6NVV7 123 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 RAB24Q969Q5 203 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 FXYD5Q96DB9 178 aa8.48□□□□□ -1.05
TOP3A-215ENST00000583328 SAT2Q96F10 170 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-215ENST00000583328 ZNF331Q9NQX6 463 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-215ENST00000583328 CTXND1A0A1B0GTU2 59 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 H3BTX0 84 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 J3QL48 77 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-215ENST00000583328 OR10J4P0C629 311 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 NKX2-5P52952 324 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-215ENST00000583328 ERVFC1-1P60608 527 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 HIST1H1AQ02539 215 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-215ENST00000583328 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
TOP3A-215ENST00000583328 ZNF493Q6ZR52 646 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 RNF182Q8N6D2 247 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 BLNKQ8WV28 456 aa8.47□□□□□ -1.05
TOP3A-215ENST00000583328 VPS13BQ7Z7G8 4022 aa8.46□□□□□ -1.05
TOP3A-215ENST00000583328 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
TOP3A-215ENST00000583328 EIF3GO75821 320 aaKnown RBP eCLIP8.46□□□□□ -1.06
TOP3A-215ENST00000583328 NDUFB4O95168 129 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 ARL14EPLP0DKL9 152 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 KRTAP10-1P60331 282 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 ZNF726P1Q15940 193 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 PSG3Q16557 428 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-215ENST00000583328 TMED6Q8WW62 240 aa8.46□□□□□ -1.06
TOP3A-215ENST00000583328 GAGE12BA1L429 117 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 GAGE7O76087 117 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 CXorf1O96002 111 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 HOXA5P20719 270 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 OR8A1Q8NGG7 326 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
TOP3A-215ENST00000583328 TMEM263Q8WUH6 116 aaKnown RBP8.45□□□□□ -1.06
TOP3A-215ENST00000583328 AAMDCQ9H7C9 122 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 PRELID1Q9Y255 219 aa8.45□□□□□ -1.06
TOP3A-215ENST00000583328 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 H3BNG1 76 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 GCHFRP30047 84 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 RAB5CP51148 216 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 ICAM4Q14773 271 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 CCDC28AQ8IWP9 274 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 RPUSD4Q96CM3 377 aaKnown RBP8.44□□□□□ -1.06
TOP3A-215ENST00000583328 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
TOP3A-215ENST00000583328 PHYHIPLQ96FC7 376 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
TOP3A-215ENST00000583328 H7BYZ3 331 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 SIVA1O15304 175 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 CDKN1BP46527 198 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 FAM213BQ8TBF2 198 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 SUN5Q8TC36 379 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
TOP3A-215ENST00000583328 PRB4P10163 310 aaPredicted RBP8.42□□□□□ -1.06
TOP3A-215ENST00000583328 FHITP49789 147 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 SULT1A2P50226 295 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 RANP62826 216 aaKnown RBP8.42□□□□□ -1.06
TOP3A-215ENST00000583328 Q6ZSN1 163 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 IQCF2Q8IXL9 164 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 MBD3L1Q8WWY6 194 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 OTORQ9NRC9 128 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 BOLA1Q9Y3E2 137 aa8.42□□□□□ -1.06
TOP3A-215ENST00000583328 A0A087WTM6 91 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 A0A096LPF7 62 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 M0R3E3 92 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 DNAH10OSP0CZ25 163 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 GCSHP23434 173 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 FGF8P55075 233 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-215ENST00000583328 FAM74A1Q5RGS3 127 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
TOP3A-215ENST00000583328 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
TOP3A-215ENST00000583328 A0A1W2PRE2 83 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 PRAC2D3DTV9 90 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
TOP3A-215ENST00000583328 CSN1S1P47710 185 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms