RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 TMEM183AQ8IXX5 376 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 KLHL30-AS1Q8NEE0 82 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 OR11H1Q8NG94 326 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 DLX4Q92988 240 aaPredicted RBP4.68□□□□□ -1.66
PTPRM-213ENST00000580949 ZC2HC1AQ96GY0 325 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 GRAMD2BQ96HH9 432 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 AGPAT4-IT1Q9H0P7 198 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 MLXQ9UH92 298 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 PRELID1Q9Y255 219 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 F8P00451 2351 aa4.68□□□□□ -1.66
PTPRM-213ENST00000580949 IGKV3-7A0A075B6H7 116 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 CA1P00915 261 aaPredicted RBP4.67□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF705DP0CH99 300 aaPredicted RBP4.67□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF705BP0CI00 300 aaPredicted RBP4.67□□□□□ -1.66
PTPRM-213ENST00000580949 MEOX2P50222 304 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 PRR27Q6MZM9 219 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 Q6ZWC4 215 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 GBGT1Q8N5D6 347 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 Q8TAT8 98 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 DPF1Q92782 380 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 SMIM12Q96EX1 92 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 FAM210BQ96KR6 192 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 SLC50A1Q9BRV3 221 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 GPR61Q9BZJ8 451 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 NRN1Q9NPD7 142 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 PPP1R14DQ9NXH3 145 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF492Q9P255 531 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 ZFP30Q9Y2G7 519 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 C2CD3Q4AC94 2353 aa4.67□□□□□ -1.66
PTPRM-213ENST00000580949 SERTM2A0A1B0GWG4 89 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 A0A1W2PPQ1 181 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 SMIM27A0A1W2PRY6 76 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 K7EQM0 130 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 CCL24O00175 119 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 PHOX2AO14813 284 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 TCF21O43680 179 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 GATCO43716 136 aaKnown RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 TYMSP04818 313 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 CSN3P07498 182 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 NPSP0C0P6 89 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 RPS10P46783 165 aaKnown RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF80P51504 273 aaPredicted RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 TCL1AP56279 114 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 IBA57Q5T440 356 aaKnown RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 COX8CQ7Z4L0 72 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 DCANP1Q8TF63 244 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 MRPL53Q96EL3 112 aaKnown RBP4.66□□□□□ -1.66
PTPRM-213ENST00000580949 PRR25Q96S07 402 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 MS4A6AQ9H2W1 248 aa4.66□□□□□ -1.66
PTPRM-213ENST00000580949 JMJD1CQ15652 2540 aa4.65□□□□□ -1.66
PTPRM-213ENST00000580949 LOC105371267A0A1B0GV96 52 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 RBAKDNA6NC62 111 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 GAGE10A6NGK3 116 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 F6UB75 175 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 K7EQG2 157 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 CT45A10P0DMU9 189 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 S100PP25815 95 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 TFPI2P48307 235 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 ZNF138P52744 262 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 RPL19P84098 196 aaKnown RBP4.65□□□□□ -1.67
PTPRM-213ENST00000580949 SAPCD1Q5SSQ6 148 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 Q6ZQT7 251 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 ZFP82Q8N141 532 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 ZNF738Q8NE65 137 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 OR9G4Q8NGQ1 327 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 GTSF1Q8WW33 167 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 RPP21Q9H633 154 aaKnown RBP4.65□□□□□ -1.67
PTPRM-213ENST00000580949 SRD5A3Q9H8P0 318 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 CLEC5AQ9NY25 188 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 TSSC4Q9Y5U2 329 aaPredicted RBP4.65□□□□□ -1.67
PTPRM-213ENST00000580949 CUBNO60494 3623 aa4.65□□□□□ -1.67
PTPRM-213ENST00000580949 WNK1Q9H4A3 2382 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 TRAV9-1A0A075B6T8 112 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 FBLL1A6NHQ2 334 aaKnown RBP4.64□□□□□ -1.67
PTPRM-213ENST00000580949 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 OVOL1O14753 267 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 SPINK4O60575 86 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 SH2D1AO60880 128 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 P01737 135 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 TRGC2P03986 189 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 GZMBP10144 247 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 BMI1P35226 326 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 PCP4P48539 62 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 DEFB114Q30KQ6 69 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 GDF5OSQ5U4N7 250 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 KCNIP4Q6PIL6 250 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.64□□□□□ -1.67
PTPRM-213ENST00000580949 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 OR8A1Q8NGG7 326 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
PTPRM-213ENST00000580949 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
PTPRM-213ENST00000580949 TSKUQ8WUA8 353 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms