RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 PDE6HQ13956 83 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 TMEM256Q8N2U0 113 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 ZNF738Q8NE65 137 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 OR11H4Q8NGC9 324 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 OR10G4Q8NGN3 311 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 OR10G9Q8NGN4 311 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 OR10G7Q8NGN6 311 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 SLC25A2Q9BXI2 301 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
CSNK1D-211ENST00000579316 TRAV8-2A0A0B4J237 113 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 DUSP14O95147 198 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 RAB2AP61019 212 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 PSG3Q16557 428 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 PAXXQ9BUH6 204 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 AAMDCQ9H7C9 122 aa9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
CSNK1D-211ENST00000579316 TRBV19A0A075B6N1 114 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 A0A096LPF7 62 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 H3BQ15 152 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 H3BTX0 84 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 BCL2L11O43521 198 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 C1QBP02746 253 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 SNRPCP09234 159 aaKnown RBP9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 PYYP10082 97 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 CDC34P49427 236 aaPredicted RBP9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 UBE2L3P68036 154 aaKnown RBP9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 IGFL4Q6B9Z1 124 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 PQLC2Q6ZP29 291 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 TMEM263Q8WUH6 116 aaKnown RBP9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 HYLS1Q96M11 299 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 LINC01587Q99440 93 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 SH3BGRL3Q9H299 93 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
CSNK1D-211ENST00000579316 IGLV5-52A0A0A0MRZ9 124 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 SLC17A3O00476 420 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 NXPH4O95158 308 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 OR10J4P0C629 311 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 NBEAP1P0C6P0 100 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 AKR1C8PQ5T2L2 129 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 RPUSD4Q96CM3 377 aaKnown RBP9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 ZNF471Q9BX82 626 aaPredicted RBP9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 CYTL1Q9NRR1 136 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
CSNK1D-211ENST00000579316 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 TMUB2Q71RG4 321 aa9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 PPP1R14DQ9NXH3 145 aa9.36□□□□□ -0.91
CSNK1D-211ENST00000579316 HIST1H1AQ02539 215 aaPredicted RBP9.35□□□□□ -0.91
CSNK1D-211ENST00000579316 OR8A1Q8NGG7 326 aa9.35□□□□□ -0.91
CSNK1D-211ENST00000579316 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
CSNK1D-211ENST00000579316 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
CSNK1D-211ENST00000579316 TNXBP22105 4242 aa9.35□□□□□ -0.91
CSNK1D-211ENST00000579316 K7EP13 123 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 STAG3L2P0CL84 134 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 STAG3L3P0CL85 134 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 TPT1P13693 172 aaKnown RBP9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 ZFP69Q49AA0 526 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 Q6ZSA8 131 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
CSNK1D-211ENST00000579316 TRAV9-2A0A087WT02 112 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 NPIPB6E9PJ23 425 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 HMGB3O15347 200 aaKnown RBP9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 NDUFB4O95168 129 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 CXorf1O96002 111 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 ARL14EPLP0DKL9 152 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 CSN1S1P47710 185 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 EIF5AL1Q6IS14 154 aaKnown RBP9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 PHYHIPLQ96FC7 376 aa9.33□□□□□ -0.92
CSNK1D-211ENST00000579316 GAGE12BA1L429 117 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 UMAD1C9J7I0 102 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 GAGE7O76087 117 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 HTN1P15515 57 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 RANP62826 216 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 LGALSLQ3ZCW2 172 aaPredicted RBP9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 EXOC3-AS1Q8N2X6 119 aa9.32□□□□□ -0.92
CSNK1D-211ENST00000579316 STOML3Q8TAV4 291 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms