RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ALKAL2Q6UX46 152 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 S100A7AQ86SG5 101 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF738Q8NE65 137 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 Q8TAT8 98 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 FAM213BQ8TBF2 198 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 C2CD4CQ8TF44 421 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 BLNKQ8WV28 456 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 C11orf52Q96A22 123 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 LINC00052Q96N35 136 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 CSTL1Q9H114 145 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 OTORQ9NRC9 128 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 TMEM167BQ9NRX6 74 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 CLEC5AQ9NY25 188 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 PRELID1Q9Y255 219 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 KLF12Q9Y4X4 402 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 ARL2-SNX15V9GYD0 113 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 RYR3Q15413 4870 aa2.72□□□□□ -1.97
SMARCE1-215ENST00000578995 TRBV20OR9-2A0A075B6H5 130 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TRAV8-1A0A0A6YYK1 113 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TRBV7-9A0A0J9YWB2 115 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TRBV6-1A0A0K0K1D8 114 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 PGPA6NDG6 321 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 SPRY2O43597 315 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 DUSP14O95147 198 aaKnown RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 CA1P00915 261 aaPredicted RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 IGKV3-20P01619 116 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 IGLV2-8P01709 118 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 PRM2P04554 102 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 NMBP08949 121 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 NHLRC4P0CG21 123 aaPredicted RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 RAB5CP51148 216 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF80P51504 273 aaPredicted RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 APOC4P55056 127 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 FXYD7P58549 80 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 EIF5AP63241 154 aaKnown RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 HIST1H1AQ02539 215 aaPredicted RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 SPINK13Q1W4C9 94 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 DEFB121Q5J5C9 76 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TEX261Q6UWH6 196 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 STHQ8IWL8 128 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 C5orf17Q8NAS9 161 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF680Q8NEM1 530 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 IGF2BP2-AS1Q96M15 143 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 LINC00479Q96M42 142 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 RCHY1Q96PM5 261 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 NEU1Q99519 415 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 LYSTQ99698 3801 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 LINC00467Q9BRT7 94 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 C11orf68Q9H3H3 251 aaKnown RBP2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TUBA4BQ9H853 241 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF492Q9P255 531 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 XCL2Q9UBD3 114 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 EPDR1Q9UM22 224 aa2.71□□□□□ -1.98
SMARCE1-215ENST00000578995 TRAV12-2A0A075B6T6 113 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 IGHV4-28A0A0C4DH34 117 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 LOC102723971A0A1B0GUV8 181 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 A0A1B0GV50 99 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 PEX7O00628 323 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 PAGE4O60829 102 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 AZU1P20160 251 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 CDKN1BP46527 198 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 CRIP1P50238 77 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 ZNF138P52744 262 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 UBE2G2P60604 165 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 SUMO1P63165 101 aaKnown RBP2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 BTN1A1Q13410 526 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 Q6AWC8 147 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 GOLT1AQ6ZVE7 132 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 Q86TA4 180 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 LINC00612Q8N6U2 182 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 CYB561D1Q8N8Q1 229 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 TMEM75Q8N9X5 138 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 C11orf72Q8NBR9 251 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 OR4B1Q8NGF8 309 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 RNASE8Q8TDE3 154 aaKnown RBP2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 RXFP4Q8TDU9 374 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 SFT2D1Q8WV19 159 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 LINC00477Q96M19 166 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 C20orf144Q9BQM9 153 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 ATG101Q9BSB4 218 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 DERL1Q9BUN8 251 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 AAMDCQ9H7C9 122 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 CELA1Q9UNI1 258 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 LENEPQ9Y5L5 61 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 U3KQK5 164 aa2.7□□□□□ -1.98
SMARCE1-215ENST00000578995 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TRAV34A0A0B4J273 112 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 A0A0J9YWU9 116 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 SERTM2A0A1B0GWG4 89 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 C7orf71A4D174 169 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 C9JQL5 133 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 NDUFS6O75380 124 aaKnown RBP2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 LTAP01374 205 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 AMBPP02760 352 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 BCL2P10415 239 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 MIFP14174 115 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 TSPOP30536 169 aa2.69□□□□□ -1.98
SMARCE1-215ENST00000578995 FLI1Q01543 452 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms