RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 CYB561D1Q8N8Q1 229 aa15.48■□□□□ 0.07
CDC42EP4-203ENST00000578516 RNASE8Q8TDE3 154 aaKnown RBP15.48■□□□□ 0.07
CDC42EP4-203ENST00000578516 TP53TG3Q9ULZ0 132 aa15.48■□□□□ 0.07
CDC42EP4-203ENST00000578516 ATG101Q9BSB4 218 aa15.47■□□□□ 0.07
CDC42EP4-203ENST00000578516 PSG8Q9UQ74 426 aa15.47■□□□□ 0.07
CDC42EP4-203ENST00000578516 TMEM189A5PLL7 270 aa15.46■□□□□ 0.07
CDC42EP4-203ENST00000578516 CCDC28AQ8IWP9 274 aa15.46■□□□□ 0.07
CDC42EP4-203ENST00000578516 ARL6IP6Q8N6S5 226 aa15.46■□□□□ 0.07
CDC42EP4-203ENST00000578516 TREM1Q9NP99 234 aa15.46■□□□□ 0.07
CDC42EP4-203ENST00000578516 DYNC2H1Q8NCM8 4307 aaKnown RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 SPART-AS1P0CW21 52 aa15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 ZNF80P51504 273 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 FLI1Q01543 452 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 EIF5AL1Q6IS14 154 aaKnown RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 CEMP1Q6PRD7 247 aaPredicted RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 TMEM263Q8WUH6 116 aaKnown RBP15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 C16orf74Q96GX8 76 aa15.45■□□□□ 0.06
CDC42EP4-203ENST00000578516 SCO2A0A1W2PP80 73 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 NMBP08949 121 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 Q86TA4 180 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 TMEM75Q8N9X5 138 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 PYGO2Q9BRQ0 406 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 NOP10Q9NPE3 64 aaKnown RBP15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 GNG13Q9P2W3 67 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 NAGKQ9UJ70 344 aa15.44■□□□□ 0.06
CDC42EP4-203ENST00000578516 TRBV7-9A0A0J9YWB2 115 aa15.43■□□□□ 0.06
CDC42EP4-203ENST00000578516 CBY3A6NI87 242 aa15.43■□□□□ 0.06
CDC42EP4-203ENST00000578516 RAB5CP51148 216 aa15.43■□□□□ 0.06
CDC42EP4-203ENST00000578516 GSN-AS1Q9NRJ2 163 aa15.43■□□□□ 0.06
CDC42EP4-203ENST00000578516 LENEPQ9Y5L5 61 aa15.43■□□□□ 0.06
CDC42EP4-203ENST00000578516 IGHV1OR15-1A0A075B7D0 117 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 SERTM2A0A1B0GWG4 89 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 NUPR2A6NF83 97 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 RGS13O14921 159 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 HTN3P15516 51 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 Q6AWC8 147 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 C11orf72Q8NBR9 251 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 ARL2-SNX15V9GYD0 113 aa15.42■□□□□ 0.06
CDC42EP4-203ENST00000578516 K7EQM0 130 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 DEFB130BP0DP73 79 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 DEFB130AP0DP74 79 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 EIF4E3Q8N5X7 224 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 C11orf21Q9P2W6 132 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 KLF12Q9Y4X4 402 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 TENM2Q9NT68 2774 aa15.41■□□□□ 0.06
CDC42EP4-203ENST00000578516 PLECQ15149 4684 aaKnown RBP15.4■□□□□ 0.06
CDC42EP4-203ENST00000578516 TRAV1-1A0A0B4J248 108 aa15.4■□□□□ 0.06
CDC42EP4-203ENST00000578516 DAD1P61803 113 aa15.4■□□□□ 0.06
CDC42EP4-203ENST00000578516 NDFIP1Q9BT67 221 aa15.4■□□□□ 0.06
CDC42EP4-203ENST00000578516 ALMS1Q8TCU4 4167 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 KMT2CQ8NEZ4 4911 aaKnown RBP15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 TRAV10A0A0B4J240 114 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 AKR1C3P42330 323 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 ZNF493Q6ZR52 646 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 HIST1H2BAQ96A08 127 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 LINC00467Q9BRT7 94 aa15.39■□□□□ 0.05
CDC42EP4-203ENST00000578516 DEFB131BA0A096LNP1 70 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 C11orf94C9JXX5 98 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 GCGP01275 180 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 TMEM183BQ1AE95 376 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 ANXA2RQ3ZCQ2 193 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 TMEM183AQ8IXX5 376 aa15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 NKX6-2Q9C056 277 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 TIMM8BQ9Y5J9 83 aaPredicted RBP15.38■□□□□ 0.05
CDC42EP4-203ENST00000578516 GAGE12BA1L429 117 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 LYRM9A8MSI8 78 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 SNURFLB1AK76 121 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 GAGE7O76087 117 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 GAGE12FP0CL80 117 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 GAGE12GP0CL81 117 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 GAGE12IP0CL82 117 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 Q6ZTI0 123 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 NHLRC2Q8NBF2 726 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 C2CD4CQ8TF44 421 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 PCNPQ8WW12 178 aaKnown RBP15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 MDFICQ9P1T7 246 aa15.37■□□□□ 0.05
CDC42EP4-203ENST00000578516 IGLL5B9A064 214 aa15.36■□□□□ 0.05
CDC42EP4-203ENST00000578516 GNRH2O43555 120 aa15.36■□□□□ 0.05
CDC42EP4-203ENST00000578516 ZC2HC1AQ96GY0 325 aa15.36■□□□□ 0.05
CDC42EP4-203ENST00000578516 DERL1Q9BUN8 251 aa15.36■□□□□ 0.05
CDC42EP4-203ENST00000578516 MANBALQ9NQG1 85 aa15.36■□□□□ 0.05
CDC42EP4-203ENST00000578516 SACSQ9NZJ4 4579 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 TEX48A0A1B0GUV7 120 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 PPT1P50897 306 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 TCL1AP56279 114 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 UBE2G1P62253 170 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 SMUG1Q53HV7 270 aa15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 MRPL16Q9NX20 251 aaKnown RBP15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 KLK5Q9Y337 293 aaPredicted RBP15.35■□□□□ 0.05
CDC42EP4-203ENST00000578516 TYMSP04818 313 aa15.34■□□□□ 0.05
CDC42EP4-203ENST00000578516 FAM159AQ6UWV7 190 aa15.34■□□□□ 0.05
CDC42EP4-203ENST00000578516 ZNF680Q8NEM1 530 aa15.34■□□□□ 0.05
CDC42EP4-203ENST00000578516 DNAH1Q9P2D7 4330 aa15.34■□□□□ 0.05
CDC42EP4-203ENST00000578516 IGHV4-4A0A075B6R2 117 aa15.33■□□□□ 0.04
CDC42EP4-203ENST00000578516 CRIP1P50238 77 aa15.33■□□□□ 0.04
CDC42EP4-203ENST00000578516 ZNF415Q09FC8 603 aa15.33■□□□□ 0.04
CDC42EP4-203ENST00000578516 LINC00612Q8N6U2 182 aa15.33■□□□□ 0.04
CDC42EP4-203ENST00000578516 FMC1Q96HJ9 113 aa15.33■□□□□ 0.04
CDC42EP4-203ENST00000578516 TRGV1A0A0A0MS02 117 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms