RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 CCL24O00175 119 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 SPINK4O60575 86 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 MT-ND6P03923 174 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
SREBF1-218ENST00000578469 FABP9Q0Z7S8 132 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
SREBF1-218ENST00000578469 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 FRZBQ92765 325 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 DLX4Q92988 240 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-218ENST00000578469 GNB1LQ9BYB4 327 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
SREBF1-218ENST00000578469 K7EQG2 157 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 VWFP04275 2813 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 TFPI2P48307 235 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 PROK1P58294 105 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 MRPL54Q6P161 138 aaKnown RBP12.75□□□□□ -0.37
SREBF1-218ENST00000578469 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 DYNLRB2Q8TF09 96 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 RAX2Q96IS3 184 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
SREBF1-218ENST00000578469 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 PHOX2AO14813 284 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BKO60814 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BJP06899 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BOP23527 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BBP33778 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BDP58876 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BCP62807 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-218ENST00000578469 FHL3Q13643 280 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST2H2BEQ16778 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-218ENST00000578469 Q6AWC8 147 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BHQ93079 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BNQ99877 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 HIST1H2BMQ99879 126 aa12.74□□□□□ -0.37
SREBF1-218ENST00000578469 TRAV2A0A0B4J234 112 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 CSN3P07498 182 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 NDUFA6P56556 154 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 RAB4BP61018 213 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 SNRPEP62304 92 aaKnown RBP12.73□□□□□ -0.37
SREBF1-218ENST00000578469 ADAMTSL5Q6ZMM2 481 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 GTSF1Q8WW33 167 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 BORCS7Q96B45 105 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 PGLYRP4Q96LB8 373 aa12.73□□□□□ -0.37
SREBF1-218ENST00000578469 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
SREBF1-218ENST00000578469 PRKDCP78527 4128 aaKnown RBP12.73□□□□□ -0.37
SREBF1-218ENST00000578469 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
SREBF1-218ENST00000578469 HLA-DQA1P01909 254 aa12.72□□□□□ -0.37
SREBF1-218ENST00000578469 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-218ENST00000578469 FOXA3P55318 350 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-218ENST00000578469 C5orf52A6NGY3 159 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 ORM1P02763 201 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 ZNF688P0C7X2 276 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 ZNF705DP0CH99 300 aaPredicted RBP12.71□□□□□ -0.37
SREBF1-218ENST00000578469 ZNF705BP0CI00 300 aaPredicted RBP12.71□□□□□ -0.37
SREBF1-218ENST00000578469 GZMBP10144 247 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 PSMG4Q5JS54 123 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
SREBF1-218ENST00000578469 CMYA5Q8N3K9 4069 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 S100A8P05109 93 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 HBBP68871 147 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 RIGQ13278 110 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
SREBF1-218ENST00000578469 TMSB15BA0A087X1C1 80 aa12.69□□□□□ -0.38
SREBF1-218ENST00000578469 TRAV25A0A0B4J276 109 aa12.69□□□□□ -0.38
SREBF1-218ENST00000578469 A0A1B0GW15 77 aa12.69□□□□□ -0.38
SREBF1-218ENST00000578469 F6UB75 175 aa12.69□□□□□ -0.38
SREBF1-218ENST00000578469 DUSP14O95147 198 aaKnown RBP12.69□□□□□ -0.38
SREBF1-218ENST00000578469 LINC01559Q495D7 138 aa12.69□□□□□ -0.38
SREBF1-218ENST00000578469 A0A1B0GUT8 65 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 UBE2CO00762 179 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 APCSP02743 223 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 CAMPP49913 170 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 DEFB114Q30KQ6 69 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 NDUFA11Q86Y39 141 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 SIGLEC8Q9NYZ4 499 aa12.68□□□□□ -0.38
SREBF1-218ENST00000578469 TRAV21A0A0B4J279 112 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 GPX1P07203 203 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 CRISP2P16562 243 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 HOXA5P20719 270 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 LEPP41159 167 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 DEFB1P60022 68 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 NSUN5P1Q3KNT7 163 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 ODF3Q96PU9 254 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
SREBF1-218ENST00000578469 A0A0J9YX75 114 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 OR4C46A6NHA9 309 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
SREBF1-218ENST00000578469 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms