RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 OR4B1Q8NGF8 309 aa9.94□□□□□ -0.82
SRSF1-202ENST00000578430 DAZAP1Q96EP5 407 aaKnown RBP9.94□□□□□ -0.82
SRSF1-202ENST00000578430 ZC2HC1AQ96GY0 325 aa9.94□□□□□ -0.82
SRSF1-202ENST00000578430 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
SRSF1-202ENST00000578430 AURKAIP1Q9NWT8 199 aaPredicted RBP9.94□□□□□ -0.82
SRSF1-202ENST00000578430 C19orf71A6NCJ1 209 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 AMBPP02760 352 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 OR5I1Q13606 314 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 RNF212Q495C1 297 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
SRSF1-202ENST00000578430 FAM162BQ5T6X4 162 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 ZFAND2AQ8N6M9 145 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 C8orf49Q96NF6 230 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 RPS10P5Q9NQ39 176 aa9.93□□□□□ -0.82
SRSF1-202ENST00000578430 SORL1Q92673 2214 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 KLLNB2CW77 178 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 H7BYZ3 331 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 EGFEM1PQ0D2K5 195 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 PRR27Q6MZM9 219 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 AMTNQ6UX39 209 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 PKD1L1Q8TDX9 2849 aa9.92□□□□□ -0.82
SRSF1-202ENST00000578430 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 TRAV21A0A0B4J279 112 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 CXorf65A6NEN9 183 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 GATCO43716 136 aaKnown RBP9.91□□□□□ -0.82
SRSF1-202ENST00000578430 P01737 135 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 GPX1P07203 203 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 PFN1P07737 140 aaKnown RBP9.91□□□□□ -0.82
SRSF1-202ENST00000578430 CDKN1BP46527 198 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 NUTF2P61970 127 aaKnown RBP9.91□□□□□ -0.82
SRSF1-202ENST00000578430 CT83Q5H943 113 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 ATRAIDQ6UW56 229 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
SRSF1-202ENST00000578430 NUDT10Q8NFP7 164 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 NUDT11Q96G61 164 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 TRRAPQ9Y4A5 3859 aa9.91□□□□□ -0.82
SRSF1-202ENST00000578430 SH2D1AO60880 128 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 IGKV3-20P01619 116 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 CRIP1P50238 77 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 ZNF124Q15973 351 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 Q6AWC8 147 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
SRSF1-202ENST00000578430 IMMP2LQ96T52 175 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 RNASE7Q9H1E1 156 aaKnown RBP9.9□□□□□ -0.82
SRSF1-202ENST00000578430 RPP21Q9H633 154 aaKnown RBP9.9□□□□□ -0.82
SRSF1-202ENST00000578430 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 NOTCH3Q9UM47 2321 aa9.9□□□□□ -0.82
SRSF1-202ENST00000578430 MGAM2Q2M2H8 2515 aa9.9□□□□□ -0.83
SRSF1-202ENST00000578430 XKRY2A2RUG3 117 aa9.89□□□□□ -0.83
SRSF1-202ENST00000578430 C7orf71A4D174 169 aa9.89□□□□□ -0.83
SRSF1-202ENST00000578430 ZNF705GA8MUZ8 300 aaPredicted RBP9.89□□□□□ -0.83
SRSF1-202ENST00000578430 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
SRSF1-202ENST00000578430 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
SRSF1-202ENST00000578430 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
SRSF1-202ENST00000578430 C20orf144Q9BQM9 153 aa9.89□□□□□ -0.83
SRSF1-202ENST00000578430 TUBA4BQ9H853 241 aa9.89□□□□□ -0.83
SRSF1-202ENST00000578430 V9GYV3 84 aa9.89□□□□□ -0.83
SRSF1-202ENST00000578430 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
SRSF1-202ENST00000578430 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
SRSF1-202ENST00000578430 A8MWL6 223 aa9.88□□□□□ -0.83
SRSF1-202ENST00000578430 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
SRSF1-202ENST00000578430 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
SRSF1-202ENST00000578430 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
SRSF1-202ENST00000578430 Q8N1Y9 231 aa9.88□□□□□ -0.83
SRSF1-202ENST00000578430 TMEM189A5PLL7 270 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 FAM231BA6NCW3 169 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 M0R2Z0 102 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 CXCL1P09341 107 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 S100PP25815 95 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 BTN1A1Q13410 526 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 SPINK13Q1W4C9 94 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 PRR9Q5T870 116 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 GFI1BQ5VTD9 330 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 KCNIP4Q6PIL6 250 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 DEFB125Q8N687 156 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 OR2D3Q8NGH3 330 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 C1QTNF4Q9BXJ3 329 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 IL36BQ9NZH7 164 aa9.87□□□□□ -0.83
SRSF1-202ENST00000578430 AGRNO00468 2067 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 J3KRW8 73 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 ORM1P02763 201 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 TSKUQ8WUA8 353 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 BTF3L4Q96K17 158 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 KCNS1Q96KK3 526 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 GFRA4Q9GZZ7 299 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 WFDC10AQ9H1F0 79 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 SRD5A3Q9H8P0 318 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 TGP01266 2768 aa9.86□□□□□ -0.83
SRSF1-202ENST00000578430 TRAV9-1A0A075B6T8 112 aa9.85□□□□□ -0.83
SRSF1-202ENST00000578430 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
SRSF1-202ENST00000578430 CRXO43186 299 aaPredicted RBP9.85□□□□□ -0.83
SRSF1-202ENST00000578430 ZNF324O75467 553 aaPredicted RBP9.85□□□□□ -0.83
SRSF1-202ENST00000578430 INSP01308 110 aa9.85□□□□□ -0.83
SRSF1-202ENST00000578430 LOC102724200A0A096LPH7 203 aaPredicted RBP9.84□□□□□ -0.83
SRSF1-202ENST00000578430 TRAV12-3A0A0B4J271 114 aa9.84□□□□□ -0.83
SRSF1-202ENST00000578430 KIR2DL5BA0A0G2JN68 375 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms