RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 C22orf46C9J442 243 aa8.2□□□□□ -1.1
PTPRM-205ENST00000577827 K7ERJ3 54 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 FREM1Q5H8C1 2179 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 CTRLP40313 264 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 LINC00527Q9UJ94 153 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 TEX48A0A1B0GUV7 120 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 H3BMM0 161 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
PTPRM-205ENST00000577827 FOXI2Q6ZQN5 318 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 FAM215AQ9Y5M1 114 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
PTPRM-205ENST00000577827 IGLL5B9A064 214 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 I3L2K1 104 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 ATP6V0E1O15342 81 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 FCN3O75636 299 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 ZNF415Q09FC8 603 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 ZNF503Q96F45 646 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 SPTAN1Q13813 2472 aaKnown RBP8.18□□□□□ -1.1
PTPRM-205ENST00000577827 EIF4EBP1Q13541 118 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-205ENST00000577827 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
PTPRM-205ENST00000577827 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 IGHV1-69DA0A0B4J2H0 117 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 SAA4P35542 130 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 TMEM219Q86XT9 240 aa8.18□□□□□ -1.1
PTPRM-205ENST00000577827 COX6B1P14854 86 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 PCNX1Q96RV3 2341 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 A0A087WWL8 130 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 SAP30O75446 220 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 CRYGCP07315 174 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 SRD5A1P18405 259 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 AMTNQ6UX39 209 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 LCNL1Q6ZST4 164 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 TNRC6AQ8NDV7 1962 aaKnown RBP8.17□□□□□ -1.1
PTPRM-205ENST00000577827 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 NDUFA4O00483 81 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 CRPP02741 224 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
PTPRM-205ENST00000577827 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 MED13Q9UHV7 2174 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 TRAV26-2A0A0B4J265 109 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 K7EIM0 57 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 IGFL2Q6UWQ7 119 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 C1orf122Q6ZSJ8 110 aa8.17□□□□□ -1.1
PTPRM-205ENST00000577827 TRGV2A0A075B6R0 118 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 PROP1O75360 226 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 RPL36AP83881 106 aaKnown RBP8.16□□□□□ -1.1
PTPRM-205ENST00000577827 IGFBPL1Q8WX77 278 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
PTPRM-205ENST00000577827 SPXQ9BT56 116 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 C2orf16Q68DN1 1984 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 J3QQQ9 107 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 RHODO00212 210 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 SLC25A20O43772 301 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 TMEM86BQ8N661 226 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 CTSZQ9UBR2 303 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 ARHGAP21Q5T5U3 1957 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 I3L3M4 83 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 FGF6P10767 208 aa8.16□□□□□ -1.1
PTPRM-205ENST00000577827 G3V4G9 280 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 STHQ8IWL8 128 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 AGPAT4-IT1Q9H0P7 198 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 ABCA4P78363 2273 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 PRSS29PA6NIE9 313 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 CGB3P0DN86 165 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 CGB7P0DN87 165 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 C1QTNF4Q9BXJ3 329 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 LINC00574Q9H8X3 128 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 H3BUX3 64 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 NBASA2RRP1 2371 aa8.15□□□□□ -1.1
PTPRM-205ENST00000577827 PLA2G2CQ5R387 149 aa8.15□□□□□ -1.11
PTPRM-205ENST00000577827 WFDC12Q8WWY7 111 aa8.15□□□□□ -1.11
PTPRM-205ENST00000577827 ZNF48Q96MX3 618 aaPredicted RBP8.15□□□□□ -1.11
PTPRM-205ENST00000577827 MLST8Q9BVC4 326 aa8.15□□□□□ -1.11
PTPRM-205ENST00000577827 TRAV12-1A0A0B4J245 112 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 LEPROTO15243 131 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 CFAP161Q6P656 301 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 OVOL3O00110 214 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 IGLV2-23P01705 113 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 FXYD2P54710 66 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 CMC4P56277 68 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-205ENST00000577827 NPBQ8NG41 125 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 MUC22E2RYF6 1773 aaPredicted RBP8.14□□□□□ -1.11
PTPRM-205ENST00000577827 A0A0U1RRA0 63 aa8.14□□□□□ -1.11
PTPRM-205ENST00000577827 IFITM1P13164 125 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms