RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HLA-DRB4P13762 266 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 GNG4P50150 75 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 SNRPD3P62318 126 aaKnown RBP5.77□□□□□ -1.49
CCDC40-215ENST00000576033 GNG5P63218 68 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 KIR3DS1Q14943 382 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 STHQ8IWL8 128 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 EXOC3-AS1Q8N2X6 119 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 ZNF738Q8NE65 137 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 GPR82Q96P67 336 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 SAV1Q9H4B6 383 aaPredicted RBP5.77□□□□□ -1.49
CCDC40-215ENST00000576033 V9GYV3 84 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 HLA-DRB4X5D2U9 266 aa5.77□□□□□ -1.49
CCDC40-215ENST00000576033 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 TGIF2-C20orf24A0A0A6YYL0 155 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 A0A0J9YX75 114 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 DEFB4AO15263 64 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 LTAP01374 205 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 PRM2P04554 102 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 SLC25A5P05141 298 aaKnown RBP5.76□□□□□ -1.49
CCDC40-215ENST00000576033 RBMY1A1P0DJD3 496 aaKnown RBP5.76□□□□□ -1.49
CCDC40-215ENST00000576033 RBMY1CP0DJD4 496 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 FLI1Q01543 452 aaPredicted RBP5.76□□□□□ -1.49
CCDC40-215ENST00000576033 RBMY1FQ15415 496 aaKnown RBP5.76□□□□□ -1.49
CCDC40-215ENST00000576033 COX8CQ7Z4L0 72 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 TMEM75Q8N9X5 138 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 OR4B1Q8NGF8 309 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 OR10G8Q8NGN5 311 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 FMC1Q96HJ9 113 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 LINC00479Q96M42 142 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 SPATA25Q9BR10 227 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 ZNF331Q9NQX6 463 aaPredicted RBP5.76□□□□□ -1.49
CCDC40-215ENST00000576033 XCL2Q9UBD3 114 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
CCDC40-215ENST00000576033 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 TRAV12-2A0A075B6T6 113 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 IGKV2-40A0A087WW87 121 aaPredicted RBP5.75□□□□□ -1.49
CCDC40-215ENST00000576033 TRAV34A0A0B4J273 112 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 DIRC3C9JPN6 131 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 M0R2Z0 102 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 IGKV2D-40P01614 121 aaPredicted RBP5.75□□□□□ -1.49
CCDC40-215ENST00000576033 MEOX2P50222 304 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 APOC4P55056 127 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 PSG9Q00887 426 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 HIST1H1AQ02539 215 aaPredicted RBP5.75□□□□□ -1.49
CCDC40-215ENST00000576033 ERCC8Q13216 396 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 OR5I1Q13606 314 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 PSG3Q16557 428 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 AMTNQ6UX39 209 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 FOXI2Q6ZQN5 318 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 Q86TA4 180 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 BAGE2Q86Y30 109 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 FAM210BQ96KR6 192 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 CSTL1Q9H114 145 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 ZMAT4Q9H898 229 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 EDA2RQ9HAV5 297 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 IL36BQ9NZH7 164 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 ZNF492Q9P255 531 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
CCDC40-215ENST00000576033 KMT2CQ8NEZ4 4911 aaKnown RBP5.74□□□□□ -1.49
CCDC40-215ENST00000576033 A0A0J9YWU9 116 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 C19orf71A6NCJ1 209 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 FBLL1A6NHQ2 334 aaKnown RBP5.74□□□□□ -1.49
CCDC40-215ENST00000576033 NPIPB6E9PJ23 425 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 J3KRW8 73 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 SPRY2O43597 315 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 NHLRC4P0CG21 123 aaPredicted RBP5.74□□□□□ -1.49
CCDC40-215ENST00000576033 ID1P41134 155 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 SPINK13Q1W4C9 94 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 Q6ZQT7 251 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 TMEM183AQ8IXX5 376 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 CSNK1G2-AS1Q8NCQ2 148 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 RNF183Q96D59 192 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 MRPL53Q96EL3 112 aaKnown RBP5.74□□□□□ -1.49
CCDC40-215ENST00000576033 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 URGCP-MRPS24S4R325 110 aa5.74□□□□□ -1.49
CCDC40-215ENST00000576033 IGHV3OR16-12A0A075B7B8 117 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 KIR2DL5BA0A0G2JN68 375 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 KIR2DL5BA0A0G2JPC4 375 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 SMIM27A0A1W2PRY6 76 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 RBAKDNA6NC62 111 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 C1orf196B1AJZ1 125 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 CRXO43186 299 aaPredicted RBP5.73□□□□□ -1.49
CCDC40-215ENST00000576033 S100PP25815 95 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 RAB5BP61020 215 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 UBE2G1P62253 170 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 CT83Q5H943 113 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 PRR9Q5T870 116 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 ZFAND6Q6FIF0 208 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 KCNIP4Q6PIL6 250 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 KIR2DL5AQ8N109 375 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 OR8A1Q8NGG7 326 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 KIR2DL5BQ8NHK3 375 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 Q8TAT8 98 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 CMTM2Q8TAZ6 248 aa5.73□□□□□ -1.49
CCDC40-215ENST00000576033 SLC50A1Q9BRV3 221 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms