RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C1orf134Q5TEV5 83 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 GNPNAT1Q96EK6 184 aaPredicted RBP12.07□□□□□ -0.48
SMG6-214ENST00000573827 KRTAP17-1Q9BYP8 105 aa12.07□□□□□ -0.48
SMG6-214ENST00000573827 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
SMG6-214ENST00000573827 CCL18P55774 89 aa12.06□□□□□ -0.48
SMG6-214ENST00000573827 Q5BKY6 102 aa12.06□□□□□ -0.48
SMG6-214ENST00000573827 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
SMG6-214ENST00000573827 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
SMG6-214ENST00000573827 TAS2R45P59539 299 aa12.05□□□□□ -0.48
SMG6-214ENST00000573827 ESRGQ1W209 222 aa12.05□□□□□ -0.48
SMG6-214ENST00000573827 Q6AWC8 147 aa12.05□□□□□ -0.48
SMG6-214ENST00000573827 OTORQ9NRC9 128 aa12.05□□□□□ -0.48
SMG6-214ENST00000573827 TRGV1A0A0A0MS02 117 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 OR2G3Q8NGZ4 309 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 UPK3BQ9BT76 320 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 LENEPQ9Y5L5 61 aa12.04□□□□□ -0.48
SMG6-214ENST00000573827 A0A096LPF7 62 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 RGS13O14921 159 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 CSN1S1P47710 185 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
SMG6-214ENST00000573827 PQLC2Q6ZP29 291 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 SUN5Q8TC36 379 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 TVP23CQ96ET8 276 aa12.03□□□□□ -0.48
SMG6-214ENST00000573827 TRGV2A0A075B6R0 118 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 TNP2Q05952 138 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 SOHLH1Q5JUK2 328 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 ARL6IP6Q8N6S5 226 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 ST6GAL2Q96JF0 529 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 Q9H8V8 135 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 MRPL16Q9NX20 251 aaKnown RBP12.02□□□□□ -0.49
SMG6-214ENST00000573827 MDFICQ9P1T7 246 aa12.02□□□□□ -0.49
SMG6-214ENST00000573827 PGPA6NDG6 321 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 STAG3L2P0CL84 134 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 STAG3L3P0CL85 134 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 C6orf223Q8N319 242 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 OR10G9Q8NGN4 311 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 PSMG3Q9BT73 122 aaPredicted RBP12.01□□□□□ -0.49
SMG6-214ENST00000573827 MED28Q9H204 178 aa12.01□□□□□ -0.49
SMG6-214ENST00000573827 MRPS16Q9Y3D3 137 aaKnown RBP12.01□□□□□ -0.49
SMG6-214ENST00000573827 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
SMG6-214ENST00000573827 ATP6V0CP27449 155 aa12□□□□□ -0.49
SMG6-214ENST00000573827 FHL2Q14192 279 aa12□□□□□ -0.49
SMG6-214ENST00000573827 HSD17B11Q8NBQ5 300 aa12□□□□□ -0.49
SMG6-214ENST00000573827 HYLS1Q96M11 299 aa12□□□□□ -0.49
SMG6-214ENST00000573827 TRAV8-1A0A0A6YYK1 113 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 RNF222A6NCQ9 220 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 G3V3Q6 166 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 GIPP09681 153 aaPredicted RBP11.99□□□□□ -0.49
SMG6-214ENST00000573827 ARL14EPLP0DKL9 152 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 MED14OSP0DP75 135 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 GNG5P63218 68 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 GOLT1AQ6ZVE7 132 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 ZNF575Q86XF7 245 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 ARPC5LQ9BPX5 153 aa11.99□□□□□ -0.49
SMG6-214ENST00000573827 A0A1W2PPV4 95 aa11.98□□□□□ -0.49
SMG6-214ENST00000573827 CDC34P49427 236 aaPredicted RBP11.98□□□□□ -0.49
SMG6-214ENST00000573827 ZNF415Q09FC8 603 aa11.98□□□□□ -0.49
SMG6-214ENST00000573827 RASL10AQ92737 203 aa11.98□□□□□ -0.49
SMG6-214ENST00000573827 RAB24Q969Q5 203 aa11.98□□□□□ -0.49
SMG6-214ENST00000573827 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
SMG6-214ENST00000573827 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
SMG6-214ENST00000573827 CRYBA4P53673 196 aa11.97□□□□□ -0.49
SMG6-214ENST00000573827 ASB13Q8WXK3 278 aa11.97□□□□□ -0.49
SMG6-214ENST00000573827 IGLV2-11P01706 119 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 GCHFRP30047 84 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 SERF2P84101 59 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 TMEM183BQ1AE95 376 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 TMEM183AQ8IXX5 376 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 PRO0255Q9UI72 69 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 TNFSF18Q9UNG2 199 aa11.96□□□□□ -0.49
SMG6-214ENST00000573827 IGHV3-16A0A0C4DH30 117 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 A0A1W2PPQ1 181 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 GGTLC3B5MD39 225 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 RPL7L1Q6DKI1 246 aaKnown RBP11.95□□□□□ -0.5
SMG6-214ENST00000573827 IQCF2Q8IXL9 164 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 ZNF479Q96JC4 524 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 RPH3ALQ9UNE2 315 aa11.95□□□□□ -0.5
SMG6-214ENST00000573827 TRGV11A0A075B6L2 103 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 F6UZH7 168 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 PAX4O43316 350 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 GNRH2O43555 120 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 TCRAP04437 139 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 FAM74A1Q5RGS3 127 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 C8orf49Q96NF6 230 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 SPXQ9BT56 116 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 C11orf21Q9P2W6 132 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 HHLA3Q9XRX5 114 aa11.94□□□□□ -0.5
SMG6-214ENST00000573827 SFTA3P0C7M3 94 aa11.93□□□□□ -0.5
SMG6-214ENST00000573827 ZNF80P51504 273 aaPredicted RBP11.93□□□□□ -0.5
SMG6-214ENST00000573827 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
SMG6-214ENST00000573827 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms