RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 AGPAT4-IT1Q9H0P7 198 aa8.67□□□□□ -1.02
NDE1-206ENST00000572967 PARLQ9H300 379 aa8.67□□□□□ -1.02
NDE1-206ENST00000572967 CXorf65A6NEN9 183 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 SPRY2O43597 315 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 INSP01308 110 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 LTAP01374 205 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 IGKV3-20P01619 116 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 CRISP2P16562 243 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 CENPWQ5EE01 88 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
NDE1-206ENST00000572967 TRAV8-1A0A0A6YYK1 113 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 TRAV34A0A0B4J273 112 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 GPX1P07203 203 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 SFTA3P0C7M3 94 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 ZNF705DP0CH99 300 aaPredicted RBP8.65□□□□□ -1.02
NDE1-206ENST00000572967 ZNF705BP0CI00 300 aaPredicted RBP8.65□□□□□ -1.02
NDE1-206ENST00000572967 ERCC8Q13216 396 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 Q6ZWC4 215 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 Q8TAT8 98 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 CSTL1Q9H114 145 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.02
NDE1-206ENST00000572967 CA1P00915 261 aaPredicted RBP8.64□□□□□ -1.03
NDE1-206ENST00000572967 IGLV2-11P01706 119 aa8.64□□□□□ -1.03
NDE1-206ENST00000572967 DEFB1P60022 68 aa8.64□□□□□ -1.03
NDE1-206ENST00000572967 TMEM256Q8N2U0 113 aa8.64□□□□□ -1.03
NDE1-206ENST00000572967 LYSTQ99698 3801 aa8.64□□□□□ -1.03
NDE1-206ENST00000572967 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
NDE1-206ENST00000572967 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 C7orf71A4D174 169 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 KLLNB2CW77 178 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 PNRC1Q12796 327 aaPredicted RBP8.63□□□□□ -1.03
NDE1-206ENST00000572967 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 FAM162BQ5T6X4 162 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 RNF183Q96D59 192 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 FAM19A4Q96LR4 140 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 IGF2BP2-AS1Q96M15 143 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 DERL1Q9BUN8 251 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 NAT8Q9UHE5 227 aa8.63□□□□□ -1.03
NDE1-206ENST00000572967 RYR2Q92736 4967 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 TMEM218A2RU14 115 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 F8W036 122 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 M0R2Z0 102 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 MGST1P10620 155 aaKnown RBP8.62□□□□□ -1.03
NDE1-206ENST00000572967 SRSF3P84103 164 aaKnown RBP8.62□□□□□ -1.03
NDE1-206ENST00000572967 TMEM241Q24JQ0 296 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
NDE1-206ENST00000572967 SGK494Q96LW2 274 aa8.62□□□□□ -1.03
NDE1-206ENST00000572967 H7BYZ3 331 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 GCGP01275 180 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 PFN1P07737 140 aaKnown RBP8.61□□□□□ -1.03
NDE1-206ENST00000572967 Q6AWC8 147 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 ZFAND2AQ8N6M9 145 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 LINC00476Q8WZB0 136 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 SEC11CQ9BY50 192 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
NDE1-206ENST00000572967 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 FABP5P3A8MUU1 101 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 C9JQL5 133 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 LY6G6CO95867 125 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 RNASE4P34096 147 aaKnown RBP8.6□□□□□ -1.03
NDE1-206ENST00000572967 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 KCNS1Q96KK3 526 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 MLST8Q9BVC4 326 aa8.6□□□□□ -1.03
NDE1-206ENST00000572967 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 J3KRW8 73 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
NDE1-206ENST00000572967 FXYD7P58549 80 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 ADIRFQ15847 76 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 PRR27Q6MZM9 219 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 LINC01551Q86U37 167 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 C15orf54Q8N8G6 183 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 TVP23CQ96ET8 276 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 SACSQ9NZJ4 4579 aa8.59□□□□□ -1.03
NDE1-206ENST00000572967 AGRNO00468 2067 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 TRGV11A0A075B6L2 103 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 TRAV12-2A0A075B6T6 113 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 TRAV12-3A0A0B4J271 114 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 DEFB4AO15263 64 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 P01737 135 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
NDE1-206ENST00000572967 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 CEMP1Q6PRD7 247 aaPredicted RBP8.58□□□□□ -1.04
NDE1-206ENST00000572967 FAM159AQ6UWV7 190 aa8.58□□□□□ -1.04
NDE1-206ENST00000572967 NHLRC2Q8NBF2 726 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms