RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ATP5G1P05496 136 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 OR10J4P0C629 311 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 ATP5G3P48201 142 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 CFAP161Q6P656 301 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
NUP88-205ENST00000572809 TMEM263Q8WUH6 116 aaKnown RBP5.24□□□□□ -1.57
NUP88-205ENST00000572809 ODF3Q96PU9 254 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 PAXXQ9BUH6 204 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 SMIM3Q9BZL3 60 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 AGPAT4-IT1Q9H0P7 198 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 NOP10Q9NPE3 64 aaKnown RBP5.24□□□□□ -1.57
NUP88-205ENST00000572809 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
NUP88-205ENST00000572809 PRYO14603 147 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 OR7C2O60412 319 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 RNF212Q495C1 297 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 FFAR4Q5NUL3 377 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 FAM122CQ6P4D5 195 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 C9orf47Q6ZRZ4 202 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 UBE2DNLQ8IWF7 75 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 C15orf53Q8NAA6 179 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 FXYD5Q96DB9 178 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 PYGO2Q9BRQ0 406 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 MED28Q9H204 178 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 WFDC1Q9HC57 220 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 MBD2Q9UBB5 411 aa5.23□□□□□ -1.57
NUP88-205ENST00000572809 KMT2AQ03164 3969 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 C7orf71A4D174 169 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 SNURFLB1AK76 121 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 M0R2N4 97 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 ZNF324O75467 553 aaPredicted RBP5.22□□□□□ -1.57
NUP88-205ENST00000572809 PTTG1O95997 202 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 GPX1P07203 203 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 NMBP08949 121 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 RNASE4P34096 147 aaKnown RBP5.22□□□□□ -1.57
NUP88-205ENST00000572809 CSN1S1P47710 185 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 TAS2R45P59539 299 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 RANP62826 216 aaKnown RBP5.22□□□□□ -1.57
NUP88-205ENST00000572809 TMEM78Q5T7P6 136 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 LYPD1Q8N2G4 141 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 FAM19A4Q96LR4 140 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 VGLL1Q99990 258 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 CTDSP1Q9GZU7 261 aa5.22□□□□□ -1.57
NUP88-205ENST00000572809 IGKV2-40A0A087WW87 121 aaPredicted RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 A0A1W2PPV4 95 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 KLLNB2CW77 178 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 GAGE7O76087 117 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 NUDT3O95989 172 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 IGKV2D-40P01614 121 aaPredicted RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 GAGE12FP0CL80 117 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 GAGE12GP0CL81 117 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 GAGE12IP0CL82 117 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 CRISP2P16562 243 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 M6PRP20645 277 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 ZNF138P52744 262 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 CD300CQ08708 224 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 DAZ2Q13117 558 aaKnown RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 BTN1A1Q13410 526 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 OR5I1Q13606 314 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 FHL2Q14192 279 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 LGALS9BQ3B8N2 356 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 ACOT6Q3I5F7 207 aaPredicted RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 ANXA2RQ3ZCQ2 193 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 KHDC3LQ587J8 217 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 EIF4E3Q8N5X7 224 aaKnown RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 RXFP4Q8TDU9 374 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 PHYHIPLQ96FC7 376 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 LINC00467Q9BRT7 94 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 ATG101Q9BSB4 218 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 Q9H3A6 140 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 ZNF492Q9P255 531 aa5.21□□□□□ -1.58
NUP88-205ENST00000572809 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.58
NUP88-205ENST00000572809 IGLV2-18A0A075B6J9 118 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 RBAKDNA6NC62 111 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 PGPA6NDG6 321 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 PGPEP1LA6NFU8 196 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 EIF3GO75821 320 aaKnown RBP eCLIP5.2□□□□□ -1.58
NUP88-205ENST00000572809 UBE2L3P68036 154 aaKnown RBP5.2□□□□□ -1.58
NUP88-205ENST00000572809 LINC00336Q6ZUF6 198 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 ZFAND2AQ8N6M9 145 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 LINC00612Q8N6U2 182 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 OR10G4Q8NGN3 311 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 OR10G9Q8NGN4 311 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 OR10G7Q8NGN6 311 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 HYLS1Q96M11 299 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 GSN-AS1Q9NRJ2 163 aa5.2□□□□□ -1.58
NUP88-205ENST00000572809 IGHV1OR15-1A0A075B7D0 117 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 TRBV7-9A0A0J9YWB2 115 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 CCL18P55774 89 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 RAB2AP61019 212 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 ZNF266Q14584 549 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 Q5BKY6 102 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 FAM74A1Q5RGS3 127 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 PQLC2Q6ZP29 291 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 Q6ZR54 194 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 Q6ZTI0 123 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 ZNF575Q86XF7 245 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 ZNF680Q8NEM1 530 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 CMTM2Q8TAZ6 248 aa5.19□□□□□ -1.58
NUP88-205ENST00000572809 GNPNAT1Q96EK6 184 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms