RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 WDR83OSQ9Y284 106 aa13.23□□□□□ -0.29
CCDC40-206ENST00000572083 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 H3BMQ9 156 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 L7N2F9 121 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 NDUFB6O95139 128 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 BCAP31P51572 246 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 VAMP2P63027 116 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 BAXQ07812 192 aa13.22□□□□□ -0.29
CCDC40-206ENST00000572083 IBA57-AS1B1ANH7 110 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 RPL29P47914 159 aaKnown RBP13.21□□□□□ -0.29
CCDC40-206ENST00000572083 PPT1P50897 306 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 CAV2P51636 162 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 LINC01556Q5JQF7 62 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 Q6ZSA8 131 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 NHLRC2Q8NBF2 726 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 RASL10AQ92737 203 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 SLC25A31Q9H0C2 315 aa13.21□□□□□ -0.29
CCDC40-206ENST00000572083 LSM5Q9Y4Y9 91 aaKnown RBP13.21□□□□□ -0.29
CCDC40-206ENST00000572083 CCSO14618 274 aa13.2□□□□□ -0.3
CCDC40-206ENST00000572083 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
CCDC40-206ENST00000572083 ZNF138P52744 262 aa13.2□□□□□ -0.3
CCDC40-206ENST00000572083 WFDC2Q14508 124 aa13.2□□□□□ -0.3
CCDC40-206ENST00000572083 TMEM183BQ1AE95 376 aa13.2□□□□□ -0.3
CCDC40-206ENST00000572083 TMEM183AQ8IXX5 376 aa13.2□□□□□ -0.3
CCDC40-206ENST00000572083 TRAV4A0A0B4J268 109 aa13.19□□□□□ -0.3
CCDC40-206ENST00000572083 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
CCDC40-206ENST00000572083 GPN1Q9HCN4 374 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-206ENST00000572083 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 IGHV3-30P01768 117 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 IGHV3-33P01772 117 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 IGHV3-30-5P0DP03 117 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 VWC2Q2TAL6 325 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 SPXQ9BT56 116 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 SLC25A2Q9BXI2 301 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 C20orf85Q9H1P6 137 aa13.18□□□□□ -0.3
CCDC40-206ENST00000572083 IGHV3-16A0A0C4DH30 117 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 FGF7P21781 194 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 OR4C5Q8NGB2 326 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 PLA2G2DQ9UNK4 145 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 PKHD1L1Q86WI1 4243 aa13.17□□□□□ -0.3
CCDC40-206ENST00000572083 TIRAPP58753 221 aa13.16□□□□□ -0.3
CCDC40-206ENST00000572083 ZNF266Q14584 549 aa13.16□□□□□ -0.3
CCDC40-206ENST00000572083 SH2D6Q7Z4S9 175 aa13.16□□□□□ -0.3
CCDC40-206ENST00000572083 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
CCDC40-206ENST00000572083 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 TRAV8-6A0A0B4J262 113 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 LECT2O14960 151 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 S100A5P33763 92 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 INPP1P49441 399 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 ZNF846Q147U1 533 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 FAM159AQ6UWV7 190 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 SCXQ7RTU7 201 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 C11orf1Q9H5F2 150 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
CCDC40-206ENST00000572083 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.14□□□□□ -0.31
CCDC40-206ENST00000572083 TRBV7-9A0A0J9YWB2 115 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 NAP1L6A6NFF2 107 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 NBEAP1P0C6P0 100 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 LINC01620Q4KN68 170 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 MIR17HGQ75NE6 70 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 PHYHIPLQ96FC7 376 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 FAM167A-AS1Q96KT0 104 aa13.14□□□□□ -0.31
CCDC40-206ENST00000572083 IGSF23A1L1A6 192 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 OR10J4P0C629 311 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
CCDC40-206ENST00000572083 BTCP35070 178 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 BAK1Q16611 211 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 Q6AWC8 147 aa13.13□□□□□ -0.31
CCDC40-206ENST00000572083 S100A11P31949 105 aa13.12□□□□□ -0.31
CCDC40-206ENST00000572083 SULT1A1P50225 295 aa13.12□□□□□ -0.31
CCDC40-206ENST00000572083 KRTAP10-4P60372 401 aaPredicted RBP13.12□□□□□ -0.31
CCDC40-206ENST00000572083 Q8N3U1 123 aa13.12□□□□□ -0.31
CCDC40-206ENST00000572083 CHAC2Q8WUX2 184 aa13.12□□□□□ -0.31
CCDC40-206ENST00000572083 M0R2P5 195 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 OXTP01178 125 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 LAGE3Q14657 143 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 TM2D2Q9BX73 214 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
CCDC40-206ENST00000572083 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
CCDC40-206ENST00000572083 GNRH2O43555 120 aa13.1□□□□□ -0.31
CCDC40-206ENST00000572083 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
CCDC40-206ENST00000572083 S100A10P60903 97 aa13.1□□□□□ -0.31
CCDC40-206ENST00000572083 STX12Q86Y82 276 aa13.1□□□□□ -0.31
CCDC40-206ENST00000572083 SLC25A29Q8N8R3 303 aa13.1□□□□□ -0.31
CCDC40-206ENST00000572083 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
CCDC40-206ENST00000572083 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 C5orf51A6NDU8 294 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
CCDC40-206ENST00000572083 CSN1S1P47710 185 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 HBG1P69891 147 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 HBG2P69892 147 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 LELP1Q5T871 98 aa13.09□□□□□ -0.31
CCDC40-206ENST00000572083 TMEM252Q8N6L7 170 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms