RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
RPAIN-208ENST00000571043 LGALS9O00182 355 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 OVOL1O14753 267 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 CAMPP49913 170 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 SLAQ13239 276 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 RIGQ13278 110 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 TP53TG3Q9ULZ0 132 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
RPAIN-208ENST00000571043 A0A1B0GUT8 65 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 FABP5P3A8MUU1 101 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-208ENST00000571043 KIAA1644Q3SXP7 199 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 TMEM256Q8N2U0 113 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 C20orf173Q96LM9 149 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
RPAIN-208ENST00000571043 SRIP30626 198 aa13.1□□□□□ -0.31
RPAIN-208ENST00000571043 BAGE3Q86Y29 109 aa13.1□□□□□ -0.31
RPAIN-208ENST00000571043 GATD1Q8NB37 220 aa13.1□□□□□ -0.31
RPAIN-208ENST00000571043 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
RPAIN-208ENST00000571043 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
RPAIN-208ENST00000571043 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
RPAIN-208ENST00000571043 PYY3Q5JQD4 70 aa13.09□□□□□ -0.31
RPAIN-208ENST00000571043 BORCS7Q96B45 105 aa13.09□□□□□ -0.31
RPAIN-208ENST00000571043 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
RPAIN-208ENST00000571043 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.31
RPAIN-208ENST00000571043 A0A087WW49 117 aa13.08□□□□□ -0.31
RPAIN-208ENST00000571043 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.31
RPAIN-208ENST00000571043 DNLZQ5SXM8 178 aa13.08□□□□□ -0.31
RPAIN-208ENST00000571043 NUPR1O60356 82 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 SERF1AO75920 110 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 LINC00310P59036 64 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 PAFAH1B2P68402 229 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 KLF5Q13887 457 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-208ENST00000571043 LINC01559Q495D7 138 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 TCTEX1D4Q5JR98 221 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 OR10J6PQ8NGY7 276 aa13.08□□□□□ -0.32
RPAIN-208ENST00000571043 SSBP4Q9BWG4 385 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-208ENST00000571043 ARMS2P0C7Q2 107 aa13.07□□□□□ -0.32
RPAIN-208ENST00000571043 ID1P41134 155 aa13.07□□□□□ -0.32
RPAIN-208ENST00000571043 TMEM158Q8WZ71 300 aa13.07□□□□□ -0.32
RPAIN-208ENST00000571043 ALKBH7Q9BT30 221 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-208ENST00000571043 NIT2Q9NQR4 276 aa13.07□□□□□ -0.32
RPAIN-208ENST00000571043 HOXD3P31249 432 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-208ENST00000571043 TMSB15BA0A087X1C1 80 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 TRBV7-9A0A0J9YWB2 115 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 ORM1P02763 201 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 IGLC6P0CF74 106 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 EDN2P20800 178 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 CTRLP40313 264 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 WFDC12Q8WWY7 111 aa13.05□□□□□ -0.32
RPAIN-208ENST00000571043 F2Z2F3 143 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 CD28P10747 220 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 JOSD1Q15040 202 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-208ENST00000571043 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 FER1L6-AS1Q8NA97 138 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 DCANP1Q8TF63 244 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 C4orf3Q8WVX3 66 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 STAB1Q9NY15 2570 aa13.04□□□□□ -0.32
RPAIN-208ENST00000571043 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-208ENST00000571043 TPPP3Q9BW30 176 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 IGKV3-7A0A075B6H7 116 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 C2orf70A6NJV1 201 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 LINC01619G3V211 115 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 KCNS1Q96KK3 526 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 FAM19A4Q96LR4 140 aa13.03□□□□□ -0.32
RPAIN-208ENST00000571043 WNK1Q9H4A3 2382 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 M0QZ24 198 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 S100A12P80511 92 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 CITED2Q99967 270 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-208ENST00000571043 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
RPAIN-208ENST00000571043 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
RPAIN-208ENST00000571043 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-208ENST00000571043 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-208ENST00000571043 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
RPAIN-208ENST00000571043 ZFAND2AQ8N6M9 145 aa13.01□□□□□ -0.33
RPAIN-208ENST00000571043 SAMD10Q9BYL1 202 aa13.01□□□□□ -0.33
RPAIN-208ENST00000571043 TSSC4Q9Y5U2 329 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-208ENST00000571043 IQCJQ1A5X6 159 aa13□□□□□ -0.33
RPAIN-208ENST00000571043 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
RPAIN-208ENST00000571043 DPF1Q92782 380 aa13□□□□□ -0.33
RPAIN-208ENST00000571043 RCHY1Q96PM5 261 aa13□□□□□ -0.33
RPAIN-208ENST00000571043 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
RPAIN-208ENST00000571043 K7EQG2 157 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 GPX1P07203 203 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 DMRTA1Q5VZB9 504 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 HIST2H2BDQ6DRA6 164 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 CITED1Q99966 193 aa12.99□□□□□ -0.33
RPAIN-208ENST00000571043 PEMTQ9UBM1 199 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms