RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR11H12B2RN74 326 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 INSL3P51460 131 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 FOXI1Q12951 378 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 OR11H1Q8NG94 326 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 GEMIN7Q9H840 131 aaKnown RBP11.97□□□□□ -0.49
SMG6-207ENST00000570756 RALYQ9UKM9 306 aaKnown RBP11.97□□□□□ -0.49
SMG6-207ENST00000570756 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 MYMXA0A1B0GTQ4 84 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 HOXA3O43365 443 aaPredicted RBP11.97□□□□□ -0.49
SMG6-207ENST00000570756 KLRD1Q13241 179 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 PTPRQQ9UMZ3 2332 aa11.97□□□□□ -0.49
SMG6-207ENST00000570756 NDUFA3O95167 84 aa11.96□□□□□ -0.49
SMG6-207ENST00000570756 DLX1P56177 255 aa11.96□□□□□ -0.49
SMG6-207ENST00000570756 S4R3C0 116 aa11.96□□□□□ -0.49
SMG6-207ENST00000570756 TRAV26-1A0A087WT03 109 aa11.96□□□□□ -0.5
SMG6-207ENST00000570756 TRAV12-1A0A0B4J245 112 aa11.96□□□□□ -0.5
SMG6-207ENST00000570756 A6NJY4 79 aa11.96□□□□□ -0.5
SMG6-207ENST00000570756 H7C1H1 209 aa11.96□□□□□ -0.5
SMG6-207ENST00000570756 COX7A1P24310 79 aa11.96□□□□□ -0.5
SMG6-207ENST00000570756 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.5
SMG6-207ENST00000570756 DLX4Q92988 240 aaPredicted RBP11.96□□□□□ -0.5
SMG6-207ENST00000570756 F8VRH5 84 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 NBR2O15453 112 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 C8orf86Q6ZUL3 223 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 C20orf78Q9BR46 151 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 PRB3Q04118 309 aaPredicted RBP11.95□□□□□ -0.5
SMG6-207ENST00000570756 BSPH1Q075Z2 132 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 IL17RELQ6ZVW7 336 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 SYT8Q8NBV8 401 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 DYNLRB1Q9NP97 96 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 C21orf62Q9NYP8 219 aa11.95□□□□□ -0.5
SMG6-207ENST00000570756 IGLV11-55A0A075B6I3 123 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 CRYBA4P53673 196 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 CFAP126Q5VTH2 177 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 RNASE6Q93091 150 aaKnown RBP11.94□□□□□ -0.5
SMG6-207ENST00000570756 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 IGHG4P01861 327 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 PPIFP30405 207 aaKnown RBP11.94□□□□□ -0.5
SMG6-207ENST00000570756 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
SMG6-207ENST00000570756 LCNL1Q6ZST4 164 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 NRACQ8N912 160 aa11.94□□□□□ -0.5
SMG6-207ENST00000570756 TIMM23O14925 209 aa11.93□□□□□ -0.5
SMG6-207ENST00000570756 SPINK8P0C7L1 97 aa11.93□□□□□ -0.5
SMG6-207ENST00000570756 ZNF672Q499Z4 452 aaPredicted RBP11.93□□□□□ -0.5
SMG6-207ENST00000570756 ATRXP46100 2492 aa11.93□□□□□ -0.5
SMG6-207ENST00000570756 LY6LH3BQJ8 138 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 DEFB109BQ30KR1 87 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 LYRM7Q5U5X0 104 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 KALRNO60229 2985 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 HLA-DMBP28068 263 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 DYNAPQ8N1N2 210 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 CDIP1Q9H305 208 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 VCX2Q9H322 139 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 SMAD5-AS1Q9Y6J3 95 aa11.92□□□□□ -0.5
SMG6-207ENST00000570756 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
SMG6-207ENST00000570756 TRGV3P03979 118 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 EFNA4P52798 201 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 UFC1Q9Y3C8 167 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 PKD1L2Q7Z442 2459 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 ROS1P08922 2347 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 ERCC8Q13216 396 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 NPBQ8NG41 125 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 CFHR4Q92496 578 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 RAXQ9Y2V3 346 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 MSRB2Q9Y3D2 182 aa11.91□□□□□ -0.5
SMG6-207ENST00000570756 TLN1Q9Y490 2541 aaKnown RBP11.9□□□□□ -0.5
SMG6-207ENST00000570756 IGF2-ASQ6U949 168 aa11.9□□□□□ -0.5
SMG6-207ENST00000570756 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
SMG6-207ENST00000570756 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.5
SMG6-207ENST00000570756 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.5
SMG6-207ENST00000570756 IGKV3D-20A0A0C4DH25 116 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 SLC25A16P16260 332 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 Q6ZUT4 128 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 SMIM2Q9BVW6 85 aa11.89□□□□□ -0.51
SMG6-207ENST00000570756 RP1L1Q8IWN7 2480 aaPredicted RBP11.89□□□□□ -0.51
SMG6-207ENST00000570756 SMCPP49901 116 aaPredicted RBP11.88□□□□□ -0.51
SMG6-207ENST00000570756 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 SPANXN1Q5VSR9 72 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 PPDPFLQ8WWR9 84 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 EPG5Q9HCE0 2579 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 LINC01549A6NIU2 74 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 PSMB2P49721 201 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 FAM57AQ8TBR7 257 aa11.88□□□□□ -0.51
SMG6-207ENST00000570756 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms