RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CXCL2P19875 107 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 RAB11AP62491 216 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 SLAQ13239 276 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 TMEM183BQ1AE95 376 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 TMEM183AQ8IXX5 376 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 TXNDC17Q9BRA2 123 aa4.54□□□□□ -1.68
SMG6-205ENST00000570659 NAA50Q9GZZ1 169 aaKnown RBP4.54□□□□□ -1.68
SMG6-205ENST00000570659 TRAV4A0A0B4J268 109 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 A0A0J9YXV3 536 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 C9JCJ5 164 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 K7EPK0 472 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 SYNGR2O43760 224 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 GPX1P07203 203 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 ATP5IP56385 69 aaPredicted RBP4.53□□□□□ -1.68
SMG6-205ENST00000570659 TAS2R19P59542 299 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 RAB4BP61018 213 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 ACOT6Q3I5F7 207 aaPredicted RBP4.53□□□□□ -1.68
SMG6-205ENST00000570659 SDIM1Q6ZPB5 146 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 TM2D2Q9BX73 214 aa4.53□□□□□ -1.68
SMG6-205ENST00000570659 TRBV19A0A075B6N1 114 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 IGKV2D-24A0A075B6R9 120 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 TRAV8-6A0A0B4J262 113 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 PHOX2AO14813 284 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 AGPAT2O15120 278 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 ZNF253O75346 499 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SNAPINO95295 136 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SLPIP03973 132 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 METTL15P1P0C7V9 234 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 TBPP20226 339 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 RAB4AP20338 218 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 UBE2MP61081 183 aaKnown RBP4.52□□□□□ -1.69
SMG6-205ENST00000570659 RPP30P78346 268 aaKnown RBP4.52□□□□□ -1.69
SMG6-205ENST00000570659 ASAH1Q13510 395 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SURF2Q15527 256 aaPredicted RBP4.52□□□□□ -1.69
SMG6-205ENST00000570659 GCSAMLQ5JQS6 135 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SAPCD1Q5SSQ6 148 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 MIC13Q5XKP0 118 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 Q8N976 141 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 OR4C5Q8NGB2 326 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SAMD10Q9BYL1 202 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 ZNF492Q9P255 531 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 PXMP4Q9Y6I8 212 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 KIF25-AS1Q9Y6Z4 181 aa4.52□□□□□ -1.69
SMG6-205ENST00000570659 SMIM31A0A1B0GVY4 71 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 FAM25AB3EWG3 89 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 FAM25CB3EWG5 89 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 FAM25GB3EWG6 89 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 ATP6V1G2O95670 118 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 CAV2P51636 162 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 CIRBPQ14011 172 aaKnown RBP4.51□□□□□ -1.69
SMG6-205ENST00000570659 CFAP126Q5VTH2 177 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 TMEM14EPQ6UXP3 125 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 BPIFA4PQ86YQ2 179 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 TVP23CQ96ET8 276 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 GTSF1LQ9H1H1 148 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 C11orf21Q9P2W6 132 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 KLK12Q9UKR0 248 aa4.51□□□□□ -1.69
SMG6-205ENST00000570659 A0A087WYN8 130 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 TRAV8-3A0A0A6YYJ7 113 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 GAGE12JA6NER3 117 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 USP17L23D6RBM5 183 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 CTDSP2O14595 271 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 TYMSP04818 313 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 HOXB5P09067 269 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 ID3Q02535 119 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 GAGE1Q13065 139 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 GAGE4Q13068 117 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 GAGE5Q13069 117 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 ATRAIDQ6UW56 229 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 C9orf163Q8N9P6 203 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 ATP6V0E2Q8NHE4 81 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 ANAPC16Q96DE5 110 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 SPXQ9BT56 116 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 CCDC59Q9P031 241 aaKnown RBP4.5□□□□□ -1.69
SMG6-205ENST00000570659 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 RAB26Q9ULW5 256 aa4.5□□□□□ -1.69
SMG6-205ENST00000570659 STRAPQ9Y3F4 350 aaKnown RBP4.5□□□□□ -1.69
SMG6-205ENST00000570659 SSSCA1O60232 199 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 COX7A2P2O60397 106 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 EIF3GO75821 320 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMG6-205ENST00000570659 SELENOTP62341 195 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 PPP1R1AQ13522 171 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 ZNF266Q14584 549 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 C10orf113Q5VZT2 155 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 NIT1Q86X76 327 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 C14orf178Q8N769 122 aaPredicted RBP4.49□□□□□ -1.69
SMG6-205ENST00000570659 SMIM4Q8WVI0 70 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 MRPL53Q96EL3 112 aaKnown RBP4.49□□□□□ -1.69
SMG6-205ENST00000570659 PHYHIPLQ96FC7 376 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 FAM167A-AS1Q96KT0 104 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 FUNDC2Q9BWH2 189 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 SLC25A2Q9BXI2 301 aa4.49□□□□□ -1.69
SMG6-205ENST00000570659 SRRQ9GZT4 340 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms