RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZNF846Q147U1 533 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 SPANXN2Q5MJ10 180 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 TMEM78Q5T7P6 136 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 PCNPQ8WW12 178 aaKnown RBP8.11□□□□□ -1.11
CAPN3-220ENST00000569827 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
CAPN3-220ENST00000569827 C20orf85Q9H1P6 137 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 Q9HAA7 133 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 ZNF492Q9P255 531 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 C5orf51A6NDU8 294 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 VWC2Q2TAL6 325 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 PHYHIPLQ96FC7 376 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 FAM167A-AS1Q96KT0 104 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 AAMDCQ9H7C9 122 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 TMEM14CQ9P0S9 112 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 NAGKQ9UJ70 344 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
CAPN3-220ENST00000569827 LRCOL1A6NCL2 159 aa8.09□□□□□ -1.11
CAPN3-220ENST00000569827 PSCAO43653 123 aa8.09□□□□□ -1.11
CAPN3-220ENST00000569827 EIF3GO75821 320 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAPN3-220ENST00000569827 C12orf45Q8N5I9 185 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-220ENST00000569827 THAP6Q8TBB0 222 aa8.09□□□□□ -1.11
CAPN3-220ENST00000569827 SLC25A31Q9H0C2 315 aa8.09□□□□□ -1.11
CAPN3-220ENST00000569827 GPN1Q9HCN4 374 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-220ENST00000569827 SULT1A1P50225 295 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 ZNF138P52744 262 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 SLAQ13239 276 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 RAB32Q13637 225 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 PDE6HQ13956 83 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 TMEM252Q8N6L7 170 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
CAPN3-220ENST00000569827 LYRM2Q9NU23 88 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-30P01768 117 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-33P01772 117 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 NBEAP1P0C6P0 100 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-30-3P0DP02 117 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-30-5P0DP03 117 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 IL7P13232 177 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 WFDC2Q14508 124 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 Q8N3U1 123 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 NHLRC2Q8NBF2 726 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 OR10G4Q8NGN3 311 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 FXYD5Q96DB9 178 aa8.07□□□□□ -1.12
CAPN3-220ENST00000569827 RBM38Q9H0Z9 239 aaKnown RBP8.07□□□□□ -1.12
CAPN3-220ENST00000569827 CENPXA8MT69 81 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 PLA2G10O15496 165 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 PVALBP20472 110 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-220ENST00000569827 S100A11P31949 105 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 PPT1P50897 306 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 RANP62826 216 aaKnown RBP8.06□□□□□ -1.12
CAPN3-220ENST00000569827 NHLH2Q02577 135 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 STX12Q86Y82 276 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 Q8N814 137 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 C2orf50Q96LR7 162 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 TMEM70Q9BUB7 260 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 PAXXQ9BUH6 204 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 OR51M1Q9H341 326 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 RPH3ALQ9UNE2 315 aa8.06□□□□□ -1.12
CAPN3-220ENST00000569827 C9JCJ5 164 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 LECT2O14960 151 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 GNRH2O43555 120 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 NMBP08949 121 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 ZNF266Q14584 549 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 OR4C5Q8NGB2 326 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 RASL10AQ92737 203 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 TXNDC17Q9BRA2 123 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 NUDT15Q9NV35 164 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 HMCN2Q8NDA2 5059 aa8.05□□□□□ -1.12
CAPN3-220ENST00000569827 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-38A0A0C4DH36 116 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 F6UZH7 168 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 LYRM1O43325 122 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 OR7C2O60412 319 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 ORM1P02763 201 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 TCRBP04435 133 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 HBG1P69891 147 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 HBG2P69892 147 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 IQCF2Q8IXL9 164 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 C10orf126Q8N4M7 172 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 HYLS1Q96M11 299 aa8.04□□□□□ -1.12
CAPN3-220ENST00000569827 TRGV11A0A075B6L2 103 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 IGHV3-73A0A0B4J1V6 119 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 SIX6O95475 246 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 TYMSP04818 313 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 IL15RAQ13261 267 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 OR10J3Q5JRS4 329 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-220ENST00000569827 Q6AWC8 147 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 NTN5Q8WTR8 489 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-220ENST00000569827 SPXQ9BT56 116 aa8.03□□□□□ -1.12
CAPN3-220ENST00000569827 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-220ENST00000569827 IBA57-AS1B1ANH7 110 aa8.02□□□□□ -1.13
CAPN3-220ENST00000569827 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms