RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 POP5Q969H6 163 aaKnown RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 DPH3Q96FX2 82 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 SAR1AQ9NR31 198 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 LSM2Q9Y333 95 aaKnown RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 MARF1Q9Y4F3 1742 aaKnown RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 PREX2Q70Z35 1606 aa2.71□□□□□ -1.97
CHD9-220ENST00000569794 PTPN23Q9H3S7 1636 aa2.71□□□□□ -1.97
CHD9-220ENST00000569794 PLEKHH2Q8IVE3 1493 aa2.71□□□□□ -1.97
CHD9-220ENST00000569794 SCN1AP35498 2009 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 NWD2Q9ULI1 1742 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 CDC42BPBQ9Y5S2 1711 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 INO80Q9ULG1 1556 aaPredicted RBP2.71□□□□□ -1.98
CHD9-220ENST00000569794 ARHGAP21Q5T5U3 1957 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 SPEF2Q9C093 1822 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 CABIN1Q9Y6J0 2220 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 IGKV1D-42A0A075B6H8 117 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 TRBV20-1A0A075B6N2 111 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 IGKV2D-24A0A075B6R9 120 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 IFITM5A6NNB3 132 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 HMSDA8MTL9 139 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 C17orf112F2Z3M2 114 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 IFNA17P01571 189 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 CLPSP04118 112 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 CTSDP07339 412 aaPredicted RBP2.71□□□□□ -1.98
CHD9-220ENST00000569794 CD14P08571 375 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 CKS2P33552 79 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 PKIAP61925 76 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 PYDC2Q56P42 97 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 OR5AS1Q8N127 324 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 LINC00301Q8NCQ3 95 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 RAB37Q96AX2 223 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 SNRNP25Q9BV90 132 aaKnown RBP2.71□□□□□ -1.98
CHD9-220ENST00000569794 SLC35B3Q9H1N7 401 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 DOCK9Q9BZ29 2069 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 PLXND1Q9Y4D7 1925 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 DUOX2Q9NRD8 1548 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 NUP205Q92621 2012 aa2.71□□□□□ -1.98
CHD9-220ENST00000569794 MAST2Q6P0Q8 1798 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 LMTK2Q8IWU2 1503 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 TRAV1-1A0A0B4J248 108 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 hDV103S1A0JD37 113 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 FNDC10F2Z333 226 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 CCL25O15444 150 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 YPEL1O60688 119 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 ZNF737O75373 536 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 TRACP01848 142 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 CD3DP04234 171 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 HIST1H1DP16402 221 aaKnown RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 ERHP84090 104 aaKnown RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 EIF4EBP1Q13541 118 aaPredicted RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 ZNF345Q14585 488 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 SPANXN5Q5MJ07 72 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 OR5AK2Q8NH90 309 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 NABP2Q9BQ15 211 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 MRPL57Q9BQC6 102 aaKnown RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 CST11Q9H112 138 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 METTL1Q9UBP6 276 aaKnown RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 MPC1Q9Y5U8 109 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 NUP210Q8TEM1 1887 aaPredicted RBP2.7□□□□□ -1.98
CHD9-220ENST00000569794 ABCA3Q99758 1704 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 ATP7BP35670 1465 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 PRXQ9BXM0 1461 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 ECM29Q5VYK3 1845 aa2.7□□□□□ -1.98
CHD9-220ENST00000569794 TTC28Q96AY4 2481 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 VCANP13611 3396 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 EEA1Q15075 1411 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 VPS8Q8N3P4 1428 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 ERBINQ96RT1 1412 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 IGLV4-60A0A075B6I1 120 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 TRAV12-2A0A075B6T6 113 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 TRAV30A0A087WSZ9 112 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 IGKV2D-26A0A0A0MRZ7 120 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 LOC107984156A0A0G2JMH3 177 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 PNMA8CA0A1B0GUJ8 204 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 PVALEFA0A1B0GWK0 134 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 OR51F1A6NGY5 319 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 ZNF736B4DX44 427 aaPredicted RBP2.69□□□□□ -1.98
CHD9-220ENST00000569794 PROSCO94903 275 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 CRPP02741 224 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 CD2P06729 351 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 ETV6P41212 452 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 ZNF90Q03938 601 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 NCMAPQ5T1S8 102 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 LINC01545Q5VT33 79 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 ARL17AQ8IVW1 177 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 OR4X2Q8NGF9 303 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 OR8B3Q8NGG8 313 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 HYLS1Q96M11 299 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 SEC11CQ9BY50 192 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 CXCL16Q9H2A7 254 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 C14orf132Q9NPU4 83 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 RPL26L1Q9UNX3 145 aaKnown RBP2.69□□□□□ -1.98
CHD9-220ENST00000569794 PLCH1Q4KWH8 1693 aa2.69□□□□□ -1.98
CHD9-220ENST00000569794 UNC80Q8N2C7 3258 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 ZNF705FA8MVS1 300 aaPredicted RBP2.68□□□□□ -1.98
CHD9-220ENST00000569794 KLF7O75840 302 aaPredicted RBP2.68□□□□□ -1.98
CHD9-220ENST00000569794 CATR1Q13166 79 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 Q6ZUT4 128 aa2.68□□□□□ -1.98
CHD9-220ENST00000569794 HMGN2P46Q86SG4 172 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms