RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LYZL1Q6UWQ5 148 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 UNQ9165/PRO28630Q6UXU0 137 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 TEX43Q6ZNM6 134 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 Q71RC1 249 aaPredicted RBP4.1□□□□□ -1.75
SF3B3-213ENST00000569687 KRTAP1-3Q8IUG1 177 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 TEX29Q8N6K0 151 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 Q8N976 141 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 MYOZ3Q8TDC0 251 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 BORCS7Q96B45 105 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 C20orf144Q9BQM9 153 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 NPFFR1Q9GZQ6 430 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 PEF1Q9UBV8 284 aaKnown RBP4.1□□□□□ -1.75
SF3B3-213ENST00000569687 SMPXQ9UHP9 88 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 APCP25054 2843 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV3OR16-8A0A075B7F1 116 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV3-66A0A0C4DH42 116 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 TRBV12-3P01733 135 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 ELANEP08246 267 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 ARMS2P0C7Q2 107 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 DDTP30046 118 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 PTTG1IPP53801 180 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 ERCC8Q13216 396 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 TMEM78Q5T7P6 136 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 FAM104BQ5XKR9 115 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 APRG1Q8IVJ8 170 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 Q8N2B8 174 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 FAM19A4Q96LR4 140 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 Q96MF0 132 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 VPREB3Q9UKI3 123 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 GCN1Q92616 2671 aaKnown RBP4.09□□□□□ -1.75
SF3B3-213ENST00000569687 CENPEQ02224 2701 aa4.09□□□□□ -1.75
SF3B3-213ENST00000569687 MAP1AP78559 2803 aaPredicted RBP4.09□□□□□ -1.75
SF3B3-213ENST00000569687 HELZ2Q9BYK8 2649 aaKnown RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 IGHV3-74A0A0B4J1X5 117 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 KIR2DL5BA0A0G2JN68 375 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 KIR2DL5BA0A0G2JPC4 375 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 C2orf70A6NJV1 201 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 LGALS9O00182 355 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 CRXO43186 299 aaPredicted RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF207O43670 478 aaKnown RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 HSBP1O75506 76 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 ORM1P02763 201 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 PPBPP02775 128 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 RNASE1P07998 156 aaKnown RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 C3orf79P0CE67 100 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF705DP0CH99 300 aaPredicted RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF705BP0CI00 300 aaPredicted RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 IL17RELQ6ZVW7 336 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 KIR2DL5AQ8N109 375 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 TMEM86BQ8N661 226 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 DEFB125Q8N687 156 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 MAPK1IP1LQ8NDC0 245 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 Q8TAT8 98 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 C20orf173Q96LM9 149 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 FOXC2Q99958 501 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 RHPN1-AS1Q9BWJ2 59 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 TMEM191AQ9H0A3 160 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 PRO1933Q9H354 126 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 DAZ1Q9NQZ3 744 aaKnown RBP4.08□□□□□ -1.76
SF3B3-213ENST00000569687 UFC1Q9Y3C8 167 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 RNF114Q9Y508 228 aa4.08□□□□□ -1.76
SF3B3-213ENST00000569687 IGHV3-49A0A0A0MS15 119 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 IGKV3D-20A0A0C4DH25 116 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 FAM181BA6NEQ2 426 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 LINC01546A6NGU7 62 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 M0R2Z0 102 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 SNAI2O43623 268 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 IGHV3-11P01762 117 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 NTF3P20783 257 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 ID1P41134 155 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 CACNG7P62955 275 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 DEFA6Q01524 100 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 PMCHL1Q16048 86 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 MRPL51Q4U2R6 128 aaKnown RBP4.07□□□□□ -1.76
SF3B3-213ENST00000569687 LBHQ53QV2 105 aaPredicted RBP4.07□□□□□ -1.76
SF3B3-213ENST00000569687 SPATA12Q7Z6I5 190 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 ZFAND2AQ8N6M9 145 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 WFDC11Q8NEX6 87 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 UBE2E2Q96LR5 201 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 MIEN1Q9BRT3 115 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 NDUFAF3Q9BU61 184 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 ZNF702PQ9H963 129 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 C11orf21Q9P2W6 132 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 LAMTOR2Q9Y2Q5 125 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.07□□□□□ -1.76
SF3B3-213ENST00000569687 PDZD2O15018 2839 aa4.07□□□□□ -1.76
SF3B3-213ENST00000569687 DOPEY2Q9Y3R5 2298 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 TMSB15BA0A087X1C1 80 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 C20orf202A1L168 122 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 TMEM213A2RRL7 107 aa4.06□□□□□ -1.76
SF3B3-213ENST00000569687 LGALS1P09382 135 aaKnown RBP4.06□□□□□ -1.76
SF3B3-213ENST00000569687 MED14OSP0DP75 135 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms