RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 FHITP49789 147 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 ZNF138P52744 262 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 SERF2P84101 59 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 FAM74A1Q5RGS3 127 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 TMEM256Q8N2U0 113 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 C16orf74Q96GX8 76 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 ST6GAL2Q96JF0 529 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 GSN-AS1Q9NRJ2 163 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
GTF3C1-210ENST00000569394 TAAR5O14804 337 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 CXorf1O96002 111 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 OR5I1Q13606 314 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 TMUB2Q71RG4 321 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 KCNRGQ8N5I3 272 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 ZFAND2AQ8N6M9 145 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 RXFP4Q8TDU9 374 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 TMEM263Q8WUH6 116 aaKnown RBP6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 KLF12Q9Y4X4 402 aa6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 TIMM8BQ9Y5J9 83 aaPredicted RBP6.4□□□□□ -1.38
GTF3C1-210ENST00000569394 DNAH1Q9P2D7 4330 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 CTXND1A0A1B0GTU2 59 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 MAP1LC3B2A6NCE7 125 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 KLLNB2CW77 178 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF561-AS1K7EIQ3 104 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF324O75467 553 aaPredicted RBP6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 NUDT3O95989 172 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 IFNA7P01567 189 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 TMEM88Q6PEY1 159 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 Q6ZTI0 123 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 PRNTQ86SH4 94 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 LYPD1Q8N2G4 141 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 CLRN3Q8NCR9 226 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 FAM213BQ8TBF2 198 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 RNASE8Q8TDE3 154 aaKnown RBP6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 FAM19A4Q96LR4 140 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 C8orf49Q96NF6 230 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 ODF3Q96PU9 254 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 LYSTQ99698 3801 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 NDUFAF3Q9BU61 184 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 MAP1LC3BQ9GZQ8 125 aa6.39□□□□□ -1.39
GTF3C1-210ENST00000569394 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TRGV1A0A0A0MS02 117 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 A0A0D9SG52 128 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 A0A0J9YY99 117 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 LYRM9A8MSI8 78 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 HMSDA8MTL9 139 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 M0R2N4 97 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 BCL2L11O43521 198 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 CST9LP1Q5W188 147 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 Q6ZNX1 250 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 UBE2DNLQ8IWF7 75 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 EIF4E3Q8N5X7 224 aaKnown RBP6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TMED6Q8WW62 240 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TVP23CQ96ET8 276 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 LINC00479Q96M42 142 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 C20orf144Q9BQM9 153 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 PYGO2Q9BRQ0 406 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TREM1Q9NP99 234 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TMEM167BQ9NRX6 74 aa6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 MRPL16Q9NX20 251 aaKnown RBP6.38□□□□□ -1.39
GTF3C1-210ENST00000569394 TRGV2A0A075B6R0 118 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 TEX48A0A1B0GUV7 120 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 A0A1B0GVG6 124 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 GGTLC3B5MD39 225 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 GNRH2O43555 120 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 TCRAP04437 139 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 CRISP2P16562 243 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 TMEM183BQ1AE95 376 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 LGALS9CQ6DKI2 356 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF493Q6ZR52 646 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 TMEM183AQ8IXX5 376 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 SFT2D1Q8WV19 159 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 EPDR1Q9UM22 224 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 PSG8Q9UQ74 426 aa6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
GTF3C1-210ENST00000569394 IGLV2-18A0A075B6J9 118 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 RBAKDNA6NC62 111 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 ATP5G1P05496 136 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 ATP5G3P48201 142 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF345Q14585 488 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 LGALSLQ3ZCW2 172 aaPredicted RBP6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 FAM159AQ6UWV7 190 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 TMEM75Q8N9X5 138 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 C5orf17Q8NAS9 161 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 MDFICQ9P1T7 246 aa6.36□□□□□ -1.39
GTF3C1-210ENST00000569394 TRAV26-1A0A087WT03 109 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 FAM74A7A6NL05 159 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 K7EQM0 130 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 PAGE4O60829 102 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 GCGP01275 180 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 TPT1P13693 172 aaKnown RBP6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 HOXA5P20719 270 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF80P51504 273 aaPredicted RBP6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 FLI1Q01543 452 aaPredicted RBP6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms