RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CMTM2Q8TAZ6 248 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 ACTR3CQ9C0K3 210 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-219ENST00000569136 Q9H3A6 140 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 OTORQ9NRC9 128 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 YTHDF2Q9Y5A9 579 aaKnown RBP6.56□□□□□ -1.36
CAPN3-219ENST00000569136 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 A0A0D9SG52 128 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 PGPA6NDG6 321 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 IGLL5B9A064 214 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 GPX1P07203 203 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 STAG3L2P0CL84 134 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 STAG3L3P0CL85 134 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 CRISP2P16562 243 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 CDC34P49427 236 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-219ENST00000569136 ZNF138P52744 262 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 RAB2AP61019 212 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 ERCC8Q13216 396 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 RPL7L1Q6DKI1 246 aaKnown RBP6.55□□□□□ -1.36
CAPN3-219ENST00000569136 LGALS9CQ6DKI2 356 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 Q6ZTC4 211 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 FAM19A4Q96LR4 140 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 PYGO2Q9BRQ0 406 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 TMEM167BQ9NRX6 74 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 ZNF492Q9P255 531 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 TIMM8BQ9Y5J9 83 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-219ENST00000569136 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
CAPN3-219ENST00000569136 STARD9Q9P2P6 4700 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 SERTM2A0A1B0GWG4 89 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 C7orf71A4D174 169 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 KLLNB2CW77 178 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 ARPC5O15511 151 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 ZNF324O75467 553 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-219ENST00000569136 CXorf1O96002 111 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 HTN1P15515 57 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 RNASE4P34096 147 aaKnown RBP6.54□□□□□ -1.36
CAPN3-219ENST00000569136 DAD1P61803 113 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
CAPN3-219ENST00000569136 ZNF345Q14585 488 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 GFI1BQ5VTD9 330 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 SUN5Q8TC36 379 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
CAPN3-219ENST00000569136 PHYHIPLQ96FC7 376 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 ST6GAL2Q96JF0 529 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 VGLL1Q99990 258 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 NKX6-2Q9C056 277 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-219ENST00000569136 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
CAPN3-219ENST00000569136 TRAV12-3A0A0B4J271 114 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 CBY3A6NI87 242 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 G3V3Q6 166 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 LY6G6CO95867 125 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 AZU1P20160 251 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 GCHFRP30047 84 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 AKR1C8PQ5T2L2 129 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 KCNRGQ8N5I3 272 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 ARPC5LQ9BPX5 153 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 APLNQ9ULZ1 77 aa6.53□□□□□ -1.36
CAPN3-219ENST00000569136 IGKV2-40A0A087WW87 121 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 CTXND1A0A1B0GTU2 59 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 FBLL1A6NHQ2 334 aaKnown RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 K7EQM0 130 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 IGKV2D-40P01614 121 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 PRM2P04554 102 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 ARL14EPLP0DKL9 152 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 PRB4P10163 310 aaPredicted RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 ANXA2RQ3ZCQ2 193 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
CAPN3-219ENST00000569136 SH3BGRL3Q9H299 93 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 CYTL1Q9NRR1 136 aa6.52□□□□□ -1.37
CAPN3-219ENST00000569136 IGHV4-4A0A075B6R2 117 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 KANTRA0A1W2PQU2 76 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 PLAC8L1A1L4L8 177 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 SNURFLB1AK76 121 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 UMAD1C9J7I0 102 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 J3KRW8 73 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
CAPN3-219ENST00000569136 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 CD300CQ08708 224 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 ZNF767PQ75MW2 155 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 EIF4E3Q8N5X7 224 aaKnown RBP6.51□□□□□ -1.37
CAPN3-219ENST00000569136 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 C5orf17Q8NAS9 161 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 STOML3Q8TAV4 291 aa6.51□□□□□ -1.37
CAPN3-219ENST00000569136 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
CAPN3-219ENST00000569136 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
CAPN3-219ENST00000569136 IGHV1OR15-1A0A075B7D0 117 aa6.5□□□□□ -1.37
CAPN3-219ENST00000569136 SMLR1H3BR10 107 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms