RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 OR10G4Q8NGN3 311 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 OR10G9Q8NGN4 311 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 OR10G7Q8NGN6 311 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 ZNRF2Q8NHG8 242 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 PHYHIPLQ96FC7 376 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 ST6GAL2Q96JF0 529 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 VGLL1Q99990 258 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
CDH3-206ENST00000567674 TMEM167BQ9NRX6 74 aa7.82□□□□□ -1.16
CDH3-206ENST00000567674 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 PGPA6NDG6 321 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 K7EQM0 130 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GAGE7O76087 117 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 NUDT3O95989 172 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GAGE12FP0CL80 117 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GAGE12GP0CL81 117 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GAGE12IP0CL82 117 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 CD300CQ08708 224 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 RASL10AQ92737 203 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 GSN-AS1Q9NRJ2 163 aa7.81□□□□□ -1.16
CDH3-206ENST00000567674 TRAV26-1A0A087WT03 109 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 IGKV2-40A0A087WW87 121 aaPredicted RBP7.8□□□□□ -1.16
CDH3-206ENST00000567674 BORCS7-ASMTA0A0B4J1R7 106 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 TRAV21A0A0B4J279 112 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 NBDYA0A0U1RRE5 68 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 RTL8CO15255 209 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 IGKV2D-40P01614 121 aaPredicted RBP7.8□□□□□ -1.16
CDH3-206ENST00000567674 BTN1A1Q13410 526 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 OR5I1Q13606 314 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 FAM159AQ6UWV7 190 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 SMIM3Q9BZL3 60 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
CDH3-206ENST00000567674 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 CXorf1O96002 111 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 CDC34P49427 236 aaPredicted RBP7.79□□□□□ -1.16
CDH3-206ENST00000567674 RGS21Q2M5E4 152 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 Q6ZTI0 123 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 NDFIP1Q9BT67 221 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 ACTR3CQ9C0K3 210 aaPredicted RBP7.79□□□□□ -1.16
CDH3-206ENST00000567674 Q9H8V8 135 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 LINC00588Q9Y4M8 146 aa7.79□□□□□ -1.16
CDH3-206ENST00000567674 J3KRW8 73 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 HOXA5P20719 270 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 ATP6V0CP27449 155 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 PIK3CD-AS1Q5SR53 167 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 SH2D6Q7Z4S9 175 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 RAB24Q969Q5 203 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 PTH2Q96A98 100 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 MRPS16Q9Y3D3 137 aaKnown RBP7.78□□□□□ -1.16
CDH3-206ENST00000567674 PKD1P98161 4303 aa7.78□□□□□ -1.16
CDH3-206ENST00000567674 TRGV1A0A0A0MS02 117 aa7.77□□□□□ -1.17
CDH3-206ENST00000567674 ORM1P02763 201 aa7.77□□□□□ -1.17
CDH3-206ENST00000567674 MRPL23Q16540 153 aaKnown RBP7.77□□□□□ -1.17
CDH3-206ENST00000567674 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
CDH3-206ENST00000567674 PKHD1P08F94 4074 aa7.77□□□□□ -1.17
CDH3-206ENST00000567674 TCRAP04437 139 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 GCHFRP30047 84 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 RAB2AP61019 212 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 PRR9Q5T870 116 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 VSIG2Q96IQ7 327 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 TMPRSS5Q9H3S3 457 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 TREM1Q9NP99 234 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 HHLA3Q9XRX5 114 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 ICOSQ9Y6W8 199 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 ARL2-SNX15V9GYD0 113 aa7.76□□□□□ -1.17
CDH3-206ENST00000567674 A0A096LPF7 62 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 CTXND1A0A1B0GTU2 59 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 RNF222A6NCQ9 220 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 M0R2N4 97 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 M0R2P5 195 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 PAX4O43316 350 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 CRYBA4P53673 196 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 ESRGQ1W209 222 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 ZFP69Q49AA0 526 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 GOLT1AQ6ZVE7 132 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 HSD17B11Q8NBQ5 300 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 OR2T35Q8NGX2 323 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 Q8TAT8 98 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 HIST1H2BAQ96A08 127 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 HYLS1Q96M11 299 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 SDF2L1Q9HCN8 221 aa7.75□□□□□ -1.17
CDH3-206ENST00000567674 EPDR1Q9UM22 224 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms