RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 FHL3Q13643 280 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 RASL11AQ6T310 242 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 RBPMS2Q6ZRY4 209 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 ATP5L2Q7Z4Y8 100 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 OR8A1Q8NGG7 326 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 FRZBQ92765 325 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 SAV1Q9H4B6 383 aaPredicted RBP8.18□□□□□ -1.1
VPS9D1-206ENST00000567379 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 TRGC1P0CF51 173 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 Q6AWC8 147 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST2H2BDQ6DRA6 164 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 MRPL54Q6P161 138 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 ADAMTSL5Q6ZMM2 481 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
VPS9D1-206ENST00000567379 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 PHOX2AO14813 284 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HLA-DQA1P01909 254 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 ORM1P02763 201 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 ZNF688P0C7X2 276 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 ZNF705DP0CH99 300 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 ZNF705BP0CI00 300 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 GZMBP10144 247 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 ZNF80P51504 273 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 NDUFA6P56556 154 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 RAB4BP61018 213 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 PSMG4Q5JS54 123 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 GTSF1Q8WW33 167 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 BORCS7Q96B45 105 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 PGLYRP4Q96LB8 373 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 MRPL18Q9H0U6 180 aaKnown RBP8.16□□□□□ -1.1
VPS9D1-206ENST00000567379 TRAV25A0A0B4J276 109 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 RIGQ13278 110 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 DEFB114Q30KQ6 69 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 NSUN5P1Q3KNT7 163 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.1
VPS9D1-206ENST00000567379 CUBNO60494 3623 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 TMSB15BA0A087X1C1 80 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 A0A1B0GW15 77 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 C5orf52A6NGY3 159 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 F6UB75 175 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 S100A8P05109 93 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 GPX1P07203 203 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 DEFB1P60022 68 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 HBBP68871 147 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 SIGLEC8Q9NYZ4 499 aa8.14□□□□□ -1.11
VPS9D1-206ENST00000567379 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 A0A0J9YX75 114 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 A0A1B0GUT8 65 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 A0A1B0GXF2 115 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 ADARB2-AS1A8MUL3 147 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 APCSP02743 223 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 FRMD6-AS1P0C7T7 363 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 CRISP2P16562 243 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 LEPP41159 167 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 CAMPP49913 170 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 FOXI2Q6ZQN5 318 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 TMEM61Q8N0U2 210 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 FAM19A4Q96LR4 140 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 ODF3Q96PU9 254 aa8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 SPAG8Q99932 426 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-206ENST00000567379 CD33P20138 364 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 TSPOP30536 169 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 CD300EQ496F6 205 aaPredicted RBP8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 LYZL1Q6UWQ5 148 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 FER1L6-AS1Q8NA97 138 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 TPPP3Q9BW30 176 aa8.12□□□□□ -1.11
VPS9D1-206ENST00000567379 J3KRW8 73 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 UBE2CO00762 179 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 ARMS2P0C7Q2 107 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 HOXA5P20719 270 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 PRR9Q5T870 116 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 APRG1Q8IVJ8 170 aa8.11□□□□□ -1.11
VPS9D1-206ENST00000567379 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 GRIFINA4D1Z8 144 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 F2Z2F3 143 aa8.1□□□□□ -1.11
VPS9D1-206ENST00000567379 PF4P02776 101 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms