RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 TRPT1Q86TN4 253 aaKnown RBP6.78□□□□□ -1.32
CAPN3-216ENST00000567071 GPR82Q96P67 336 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 Q9H3A6 140 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 Q9H8V8 135 aa6.78□□□□□ -1.32
CAPN3-216ENST00000567071 YTHDF2Q9Y5A9 579 aaKnown RBP6.78□□□□□ -1.32
CAPN3-216ENST00000567071 TRBV19A0A075B6N1 114 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 A0A087X0K7 114 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 LOC102723971A0A1B0GUV8 181 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 PAGE4O60829 102 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 NUDT3O95989 172 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 IFNA1P01562 189 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 BCL2P10415 239 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 ASIPP42127 132 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 ATP5G3P48201 142 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
CAPN3-216ENST00000567071 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
CAPN3-216ENST00000567071 CST9LP1Q5W188 147 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 COMMD7Q86VX2 200 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 TMEM70Q9BUB7 260 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
CAPN3-216ENST00000567071 FAM74A7A6NL05 159 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 GGTLC3B5MD39 225 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 NDUFB4O95168 129 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 PPT1P50897 306 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 DAD1P61803 113 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 GUK1Q16774 197 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 SUN5Q8TC36 379 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 C16orf92Q96LL3 132 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 FAM210AQ96ND0 272 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 MS4A6AQ9H2W1 248 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 DKK2Q9UBU2 259 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 RPH3ALQ9UNE2 315 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
CAPN3-216ENST00000567071 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 LINC00862A6NCI5 91 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 RBFOX3A6NFN3 312 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 SOCS3O14543 225 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 GNG5P63218 68 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 PDE6HQ13956 83 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 KIR3DS1Q14943 382 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 ZNF506Q5JVG8 444 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 FAM222AQ5U5X8 452 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 FAM24BQ8N5W8 94 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 SLC50A1Q9BRV3 221 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 EIF5A2Q9GZV4 153 aaKnown RBP6.75□□□□□ -1.33
CAPN3-216ENST00000567071 OTORQ9NRC9 128 aa6.75□□□□□ -1.33
CAPN3-216ENST00000567071 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 A0A1W2PRE2 83 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 PGPA6NDG6 321 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 SMIM9A6NGZ8 99 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 K7EQG2 157 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 M0R3E3 92 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 ZNF253O75346 499 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
CAPN3-216ENST00000567071 MEOX2P50222 304 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 SUMO1P63165 101 aaKnown RBP6.74□□□□□ -1.33
CAPN3-216ENST00000567071 SRSF3P84103 164 aaKnown RBP6.74□□□□□ -1.33
CAPN3-216ENST00000567071 PSG9Q00887 426 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 MEF2BQ02080 365 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-216ENST00000567071 DCANP1Q8TF63 244 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 LINC00052Q96N35 136 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 NEU1Q99519 415 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 AAMDCQ9H7C9 122 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-216ENST00000567071 VAX2Q9UIW0 290 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 ARL2-SNX15V9GYD0 113 aa6.74□□□□□ -1.33
CAPN3-216ENST00000567071 TRAV2A0A0B4J234 112 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 ZNF705FA8MVS1 300 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-216ENST00000567071 ZNF688P0C7X2 276 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 CEBPGP53567 150 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 DEFB1P60022 68 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 SLC7A5P1Q8MH63 180 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 TREM1Q9NP99 234 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 MED9Q9NWA0 146 aa6.73□□□□□ -1.33
CAPN3-216ENST00000567071 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 IGKV2-40A0A087WW87 121 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-216ENST00000567071 RAB19A4D1S5 217 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 KNCNA6PVL3 124 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 C9JQL5 133 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 PRAC2D3DTV9 90 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 ISLRO14498 428 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 IGKV2D-40P01614 121 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-216ENST00000567071 TAGLN2P37802 199 aaKnown RBP6.72□□□□□ -1.33
CAPN3-216ENST00000567071 ID1P41134 155 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 LINC00315P59091 139 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 PEA15Q15121 130 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 PSMG4Q5JS54 123 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 ACTL10Q5JWF8 245 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 C5orf17Q8NAS9 161 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms