RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 MUC21Q5SSG8 566 aa10.95□□□□□ -0.66
CDH3-205ENST00000566808 RABL2AQ9UBK7 228 aaPredicted RBP10.95□□□□□ -0.66
CDH3-205ENST00000566808 NDUFB4O95168 129 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 OR1L4Q8NGR5 311 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 RAB2BQ8WUD1 216 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 PFDN5Q99471 154 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 GGACTQ9BVM4 153 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 ZNF492Q9P255 531 aa10.94□□□□□ -0.66
CDH3-205ENST00000566808 SFT2D2O95562 160 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 BAK1Q16611 211 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 TMEM183BQ1AE95 376 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 Q6ZRG5 221 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 TMEM183AQ8IXX5 376 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 Q8N3U1 123 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 PAXXQ9BUH6 204 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 TIMM9Q9Y5J7 89 aa10.93□□□□□ -0.66
CDH3-205ENST00000566808 IGHV3-16A0A0C4DH30 117 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 RNF222A6NCQ9 220 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 TSC22D2O75157 780 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 PPP1R1AQ13522 171 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 RHOHQ15669 191 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 Q8TAT8 98 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 RMI2Q96E14 147 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 GTSF1LQ9H1H1 148 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
CDH3-205ENST00000566808 M0R2P5 195 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
CDH3-205ENST00000566808 CAMLGP49069 296 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 ZNF138P52744 262 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 RAB31Q13636 194 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 ZNF266Q14584 549 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 C12orf45Q8N5I9 185 aaPredicted RBP10.91□□□□□ -0.66
CDH3-205ENST00000566808 SLC25A29Q8N8R3 303 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 SOSTQ9BQB4 213 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 PRADC1Q9BSG0 188 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
CDH3-205ENST00000566808 FBLL1A6NHQ2 334 aaKnown RBP10.9□□□□□ -0.66
CDH3-205ENST00000566808 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
CDH3-205ENST00000566808 CTDSP2O14595 271 aa10.9□□□□□ -0.66
CDH3-205ENST00000566808 UBE2MP61081 183 aaKnown RBP10.9□□□□□ -0.66
CDH3-205ENST00000566808 CTF1Q16619 201 aa10.9□□□□□ -0.66
CDH3-205ENST00000566808 FAM159AQ6UWV7 190 aa10.9□□□□□ -0.66
CDH3-205ENST00000566808 DIRAS2Q96HU8 199 aa10.9□□□□□ -0.66
CDH3-205ENST00000566808 TRAV8-1A0A0A6YYK1 113 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 ATP6V1G2O95670 118 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 TAS2R30P59541 319 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 ARL16Q0P5N6 197 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 Q6AWC8 147 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
CDH3-205ENST00000566808 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
CDH3-205ENST00000566808 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
CDH3-205ENST00000566808 TRBV6-4A0A1B0GX49 114 aa10.88□□□□□ -0.67
CDH3-205ENST00000566808 PYYP10082 97 aa10.88□□□□□ -0.67
CDH3-205ENST00000566808 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
CDH3-205ENST00000566808 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
CDH3-205ENST00000566808 RSL24D1Q9UHA3 163 aaKnown RBP10.88□□□□□ -0.67
CDH3-205ENST00000566808 VWC2Q2TAL6 325 aa10.87□□□□□ -0.67
CDH3-205ENST00000566808 SLC25A21Q9BQT8 299 aaPredicted RBP10.87□□□□□ -0.67
CDH3-205ENST00000566808 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 CIDEAO60543 219 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 DYNC2LI1Q8TCX1 351 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 OR51M1Q9H341 326 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 GPN1Q9HCN4 374 aaPredicted RBP10.86□□□□□ -0.67
CDH3-205ENST00000566808 SLC39A9Q9NUM3 307 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 NAGKQ9UJ70 344 aa10.86□□□□□ -0.67
CDH3-205ENST00000566808 SCGB1D2O95969 90 aa10.85□□□□□ -0.67
CDH3-205ENST00000566808 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 C5orf51A6NDU8 294 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 GAS8-AS1O95177 125 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 OR10J4P0C629 311 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 SEC11BP0C7V7 166 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 RPL29P47914 159 aaKnown RBP10.84□□□□□ -0.67
CDH3-205ENST00000566808 AP3S2P59780 193 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 ATP5SQ99766 215 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 WDR83OSQ9Y284 106 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CDH3-205ENST00000566808 HSD17B11Q8NBQ5 300 aa10.83□□□□□ -0.68
CDH3-205ENST00000566808 A0A0D9SG52 128 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 C7orf66A4D0T2 115 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 MGST1P10620 155 aaKnown RBP10.82□□□□□ -0.68
CDH3-205ENST00000566808 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 CFAP126Q5VTH2 177 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 UQCC1Q9NVA1 299 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 URGCP-MRPS24S4R325 110 aa10.82□□□□□ -0.68
CDH3-205ENST00000566808 A0A087WWC5 75 aa10.81□□□□□ -0.68
CDH3-205ENST00000566808 C9orf170A2RU37 121 aa10.81□□□□□ -0.68
CDH3-205ENST00000566808 IAH1Q2TAA2 248 aaPredicted RBP10.81□□□□□ -0.68
CDH3-205ENST00000566808 C2orf50Q96LR7 162 aa10.81□□□□□ -0.68
CDH3-205ENST00000566808 GNRH2O43555 120 aa10.8□□□□□ -0.68
CDH3-205ENST00000566808 TYMSP04818 313 aa10.8□□□□□ -0.68
CDH3-205ENST00000566808 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
CDH3-205ENST00000566808 LINC00694P0DN24 101 aa10.8□□□□□ -0.68
CDH3-205ENST00000566808 CSN1S1P47710 185 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms