RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 HS3ST2Q9Y278 367 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 PLXNA1Q9UIW2 1896 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 CACNA1DQ01668 2161 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 MYO9BQ13459 2157 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 PRR14LQ5THK1 2151 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 SCN8AQ9UQD0 1980 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ROCK2O75116 1388 aaKnown RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 NBEAQ8NFP9 2946 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 MYH7BA7E2Y1 1941 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 ZNF831Q5JPB2 1677 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 PHIPQ8WWQ0 1821 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 TIMM17BO60830 172 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 CPSF4O95639 269 aaKnown RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 IFNA4P05014 189 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 TRGC1P0CF51 173 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 IGLC6P0CF74 106 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 ZNF25P17030 456 aaPredicted RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 CRYGSP22914 178 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 S100PP25815 95 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 RPL22P35268 128 aaKnown RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 HINT1P49773 126 aaPredicted RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 DEFB134Q4QY38 66 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 HSD17B12Q53GQ0 312 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 HMGN2P46Q86SG4 172 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 CTAGE3PQ8IX95 158 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 C3orf56Q8N813 242 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 C1orf54Q8WWF1 131 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 PRELID3AQ96N28 172 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 PKMYT1Q99640 499 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 BCL2L10Q9HD36 194 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 GNG8Q9UK08 70 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM215AQ9Y5M1 114 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 TLN1Q9Y490 2541 aaKnown RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 CPSF1Q10570 1443 aaKnown RBP1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 VPS8Q8N3P4 1428 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 VPS13AQ96RL7 3174 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 LRRC37AA6NMS7 1700 aa1.97□□□□□ -2.09
HERPUD1-211ENST00000566550 TECTAO75443 2155 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 CELSR3Q9NYQ7 3312 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 IGSF10Q6WRI0 2623 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 EP300Q09472 2414 aaPredicted RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 IGHV1-18A0A0C4DH31 117 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 TRBV10-2A0A0K0K1G8 114 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 C7orf71A4D174 169 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 C19orf84I3L1E1 186 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 PSCAO43653 123 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 SMIM24O75264 130 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 SHBGP04278 402 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 TCRAP04437 139 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 FXYD2P54710 66 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 FOXA3P55318 350 aaPredicted RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 SELENOWP63302 87 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 PHF5AQ7RTV0 110 aaKnown RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 KRTAP11-1Q8IUC1 163 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 MMGT1Q8N4V1 131 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 Q8NDZ9 215 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 OR4X2Q8NGF9 303 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 ZNF418Q8TF45 676 aaPredicted RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 CHCHD1Q96BP2 118 aaKnown RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 NAA38Q9BRA0 125 aaKnown RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 LINC00470Q9BZP3 86 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 TAF9BQ9HBM6 251 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 RIC1Q4ADV7 1423 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 NUP210LQ5VU65 1888 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 MAP2P11137 1827 aaKnown RBP1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 SLX4Q8IY92 1834 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 EML6Q6ZMW3 1958 aa1.96□□□□□ -2.1
HERPUD1-211ENST00000566550 GREB1Q4ZG55 1949 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 OBSL1O75147 1896 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 ZFHX3Q15911 3703 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 IGKV2-28A0A075B6P5 120 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 TRBV7-6A0A0J9YX20 115 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 MEIS3P1A6NDR6 274 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 SDCBPO00560 298 aaPredicted RBP1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 IGF2P01344 180 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 IGKV2D-28P01615 120 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 P0DMU3 169 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM231AP0DMU4 169 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 FAM231CP0DMU5 169 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 MGST1P10620 155 aaKnown RBP1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 HRES1P13985 223 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 IL9P15248 144 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 AZU1P20160 251 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 TMEM258P61165 79 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 KLRD1Q13241 179 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 EIF4EBP1Q13541 118 aaPredicted RBP1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 MOBPQ13875 183 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 CDK5R1Q15078 307 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 TMEM14EPQ6UXP3 125 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 Q6ZQT0 140 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 SH2D6Q7Z4S9 175 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 DYNAPQ8N1N2 210 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 OR4S1Q8NGB4 309 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 OR4B1Q8NGF8 309 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 MRPS24Q96EL2 167 aaKnown RBP1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 C12orf57Q99622 126 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 GGACTQ9BVM4 153 aa1.95□□□□□ -2.1
HERPUD1-211ENST00000566550 PRRC2BQ5JSZ5 2229 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms