RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 A0A087WWL8 130 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 LOC107984640A0A0U1RRK4 108 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 M0R2P5 195 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 MOSP00540 346 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 FGFRL1Q8N441 504 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 LINC01548A6NM66 108 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 FGF12P61328 243 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 GUSBP1Q15486 140 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 SBSPONQ8IVN8 264 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 IGHV7-81A0A0B4J1V7 117 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 FOXF2Q12947 444 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 ATP1A1-AS1Q5TC04 95 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 PLPPR2Q96GM1 343 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 FAM167A-AS1Q96KT0 104 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 VPREB3Q9UKI3 123 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 GFRA3O60609 400 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 GFERP55789 205 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 ATXN8Q156A1 80 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 ETDBQ3ZM63 59 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 DEFB104AQ8WTQ1 72 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 PATE1Q8WXA2 126 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FAM53AQ6NSI3 398 aaPredicted RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 STHQ8IWL8 128 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 CFHR4Q92496 578 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FXYD5Q96DB9 178 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 COL9A1P20849 921 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FHL3Q13643 280 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 IBA57Q5T440 356 aaKnown RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 NDUFA11Q86Y39 141 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 LINC00482Q8N8I6 264 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 RPP21Q9H633 154 aaKnown RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 U3KQK5 164 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 DKK1O94907 266 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 HERVK_113P63121 156 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FOXC1Q12948 553 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 CCL4L1Q8NHW4 92 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 RFESDQ8TAC1 157 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 SIRPDQ9H106 197 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 AGRNO00468 2067 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 hADV29S1A0JD25 119 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 TCRAP04437 139 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FMC1Q96HJ9 113 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 ZGRF1Q86YA3 2104 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 TRAV12-1A0A0B4J245 112 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 A0A1W2PNR3 127 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 CRLF1O75462 422 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 RIGQ13278 110 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FAM236DA0A1B0GTK5 79 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 C12orf77C9JDV5 145 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 CCL21O00585 134 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 PEX7O00628 323 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 FAM236CP0DP71 79 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 NDUFV3P56181 108 aaKnown RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 NPFFO15130 113 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 CDK2AP2O75956 126 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 SPINK2P20155 84 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 MRPL53Q96EL3 112 aaKnown RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 C19orf71A6NCJ1 209 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 PCNX2A6NKB5 2137 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 RBMY1FQ15415 496 aaKnown RBP2.33□□□□□ -2.04
CHD9-218ENST00000566029 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 DEFB123Q8N688 67 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 ZNF414Q96IQ9 312 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 LINC01600Q96MT4 127 aa2.33□□□□□ -2.04
CHD9-218ENST00000566029 M0R1W7 72 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 RPL35AP18077 110 aaKnown RBP2.32□□□□□ -2.04
CHD9-218ENST00000566029 PFN2P35080 140 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 PATE2Q6UY27 113 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 LINC00305Q7Z4B0 112 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 AMELXQ99217 191 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 IGHV3-21A0A0B4J1V1 117 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 UBE2D1P51668 147 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 EFNB3Q15768 340 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 CFAP126Q5VTH2 177 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 IGHV1OR21-1A0A087WYE8 117 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 CCL16O15467 120 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 NDUFS7O75251 213 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 PCP2Q8IVA1 136 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 LINC00474Q9P2X8 69 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 SOCS3O14543 225 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 GFRA4Q9GZZ7 299 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 PAX8Q06710 450 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 ZMAT4Q9H898 229 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 TIRAPP58753 221 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 SEC61BP60468 96 aaKnown RBP2.32□□□□□ -2.04
CHD9-218ENST00000566029 IFI27L1Q96BM0 104 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 ZNF837Q96EG3 531 aaPredicted RBP2.32□□□□□ -2.04
CHD9-218ENST00000566029 C2orf16Q68DN1 1984 aa2.32□□□□□ -2.04
CHD9-218ENST00000566029 IGKV3D-20A0A0C4DH25 116 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms