RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 EMP1P54849 157 aa15.07■□□□□ 0
SHCBP1-205ENST00000566016 CCDC28AQ8IWP9 274 aa15.07■□□□□ 0
SHCBP1-205ENST00000566016 PHLDA1Q8WV24 401 aaPredicted RBP15.07■□□□□ 0
SHCBP1-205ENST00000566016 HIST1H2BAQ96A08 127 aa15.07■□□□□ 0
SHCBP1-205ENST00000566016 IFNA7P01567 189 aa15.06■□□□□ 0
SHCBP1-205ENST00000566016 PRM2P04554 102 aa15.06■□□□□ 0
SHCBP1-205ENST00000566016 AZU1P20160 251 aa15.06■□□□□ 0
SHCBP1-205ENST00000566016 FAM222AQ5U5X8 452 aa15.06■□□□□ 0
SHCBP1-205ENST00000566016 Q6AWC8 147 aa15.06■□□□□ 0
SHCBP1-205ENST00000566016 CEMP1Q6PRD7 247 aaPredicted RBP15.06■□□□□ 0
SHCBP1-205ENST00000566016 LYRM9A8MSI8 78 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 PEX7O00628 323 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 IGLV2-11P01706 119 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 HTN1P15515 57 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 NKX2-5P52952 324 aaPredicted RBP15.05■□□□□ -0
SHCBP1-205ENST00000566016 C12orf74Q32Q52 190 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 NDFIP1Q9BT67 221 aa15.05■□□□□ -0
SHCBP1-205ENST00000566016 TEX46H3BTG2 121 aa15.04■□□□□ -0
SHCBP1-205ENST00000566016 FLI1Q01543 452 aaPredicted RBP15.04■□□□□ -0
SHCBP1-205ENST00000566016 Q6ZTC4 211 aa15.04■□□□□ -0
SHCBP1-205ENST00000566016 TVP23CQ96ET8 276 aa15.04■□□□□ -0
SHCBP1-205ENST00000566016 TREM1Q9NP99 234 aa15.04■□□□□ -0
SHCBP1-205ENST00000566016 KMT2CQ8NEZ4 4911 aaKnown RBP15.04■□□□□ -0
SHCBP1-205ENST00000566016 ANXA2RQ3ZCQ2 193 aa15.03■□□□□ -0
SHCBP1-205ENST00000566016 ZNF680Q8NEM1 530 aa15.03■□□□□ -0
SHCBP1-205ENST00000566016 PSG8Q9UQ74 426 aa15.03■□□□□ -0
SHCBP1-205ENST00000566016 KLK5Q9Y337 293 aaPredicted RBP15.03■□□□□ -0
SHCBP1-205ENST00000566016 TIMM8BQ9Y5J9 83 aaPredicted RBP15.03■□□□□ -0
SHCBP1-205ENST00000566016 F6UZH7 168 aa15.02■□□□□ -0
SHCBP1-205ENST00000566016 PAGE4O60829 102 aa15.02■□□□□ -0
SHCBP1-205ENST00000566016 CST9LP1Q5W188 147 aa15.02■□□□□ -0
SHCBP1-205ENST00000566016 EIF4E3Q8N5X7 224 aaKnown RBP15.02■□□□□ -0
SHCBP1-205ENST00000566016 DYNC2H1Q8NCM8 4307 aaKnown RBP15.02■□□□□ -0
SHCBP1-205ENST00000566016 TRAV10A0A0B4J240 114 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 A0A1B0GV50 99 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 RGS13O14921 159 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 MANBALQ9NQG1 85 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 ATP5G3P48201 142 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 SAPCD1Q5SSQ6 148 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 SGK494Q96LW2 274 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 KLF12Q9Y4X4 402 aa15.01□□□□□ -0.01
SHCBP1-205ENST00000566016 IGHV1OR15-1A0A075B7D0 117 aa15□□□□□ -0.01
SHCBP1-205ENST00000566016 IBA57Q5T440 356 aaKnown RBP15□□□□□ -0.01
SHCBP1-205ENST00000566016 C11orf72Q8NBR9 251 aa15□□□□□ -0.01
SHCBP1-205ENST00000566016 TRAV21A0A0B4J279 112 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 CBY3A6NI87 242 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 DAZ2Q13117 558 aaKnown RBP14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 TDRG1Q3Y452 100 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 ALKAL2Q6UX46 152 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 Q6ZQT7 251 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 PRNTQ86SH4 94 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 Q86TA4 180 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 FMC1Q96HJ9 113 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 LINC00479Q96M42 142 aa14.99□□□□□ -0.01
SHCBP1-205ENST00000566016 SNURFLB1AK76 121 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 DAD1P61803 113 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 ZNF767PQ75MW2 155 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 C2CD4CQ8TF44 421 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 TXNDC17Q9BRA2 123 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 BOLA1Q9Y3E2 137 aa14.98□□□□□ -0.01
SHCBP1-205ENST00000566016 TRBV6-1A0A0K0K1D8 114 aa14.97□□□□□ -0.01
SHCBP1-205ENST00000566016 CCL20P78556 96 aa14.97□□□□□ -0.01
SHCBP1-205ENST00000566016 SMUG1Q53HV7 270 aa14.97□□□□□ -0.01
SHCBP1-205ENST00000566016 NOP10Q9NPE3 64 aaKnown RBP14.97□□□□□ -0.01
SHCBP1-205ENST00000566016 GNG13Q9P2W3 67 aa14.97□□□□□ -0.01
SHCBP1-205ENST00000566016 DEFB131BA0A096LNP1 70 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 TRAV34A0A0B4J273 112 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 TCL1AP56279 114 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 TCTAP57738 103 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 FAM159AQ6UWV7 190 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 COX8CQ7Z4L0 72 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 LINC00612Q8N6U2 182 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 ZFP30Q9Y2G7 519 aa14.96□□□□□ -0.01
SHCBP1-205ENST00000566016 PFN1P07737 140 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 UBE2G1P62253 170 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 TMEM183BQ1AE95 376 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 C8orf49Q96NF6 230 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 PLECQ15149 4684 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 LYSTQ99698 3801 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 GCGP01275 180 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 IFNA1P01562 189 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 S100A9P06702 114 aaKnown RBP14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 AKR1C3P42330 323 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 BLOC1S1P78537 153 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 MUC21Q5SSG8 566 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 GSN-AS1Q9NRJ2 163 aa14.95□□□□□ -0.02
SHCBP1-205ENST00000566016 TRGV11A0A075B6L2 103 aa14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 DEFB130BP0DP73 79 aa14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 DEFB130AP0DP74 79 aa14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 TAGLN2P37802 199 aaKnown RBP14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 C11orf52Q96A22 123 aa14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 TP53TG3Q9ULZ0 132 aa14.94□□□□□ -0.02
SHCBP1-205ENST00000566016 SCO2A0A1W2PP80 73 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 LTAP01374 205 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 ZNF80P51504 273 aaPredicted RBP14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 ZNF415Q09FC8 603 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 LYPD6BQ8NI32 183 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 KCNS1Q96KK3 526 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 FAM210BQ96KR6 192 aa14.93□□□□□ -0.02
SHCBP1-205ENST00000566016 MUC4Q99102 2169 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms