RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 SMIM3Q9BZL3 60 aa16.3■□□□□ 0.2
RAB40C-209ENST00000565511 RANP62826 216 aaKnown RBP16.29■□□□□ 0.2
RAB40C-209ENST00000565511 FFAR4Q5NUL3 377 aa16.29■□□□□ 0.2
RAB40C-209ENST00000565511 MUC21Q5SSG8 566 aa16.29■□□□□ 0.2
RAB40C-209ENST00000565511 MARVELD1Q9BSK0 173 aa16.29■□□□□ 0.2
RAB40C-209ENST00000565511 WFDC1Q9HC57 220 aa16.29■□□□□ 0.2
RAB40C-209ENST00000565511 KCNIP2Q9NS61 270 aa16.29■□□□□ 0.2
RAB40C-209ENST00000565511 MPC2O95563 127 aa16.28■□□□□ 0.2
RAB40C-209ENST00000565511 UBE2L3P68036 154 aaKnown RBP16.28■□□□□ 0.2
RAB40C-209ENST00000565511 A0A1W2PPQ1 181 aa16.27■□□□□ 0.2
RAB40C-209ENST00000565511 CDK2AP2O75956 126 aa16.27■□□□□ 0.2
RAB40C-209ENST00000565511 LINC00315P59091 139 aa16.27■□□□□ 0.2
RAB40C-209ENST00000565511 CYCSP99999 105 aaKnown RBP16.27■□□□□ 0.2
RAB40C-209ENST00000565511 Q6ZRN7 208 aaPredicted RBP16.27■□□□□ 0.2
RAB40C-209ENST00000565511 MDFICQ9P1T7 246 aa16.27■□□□□ 0.2
RAB40C-209ENST00000565511 C17orf112F2Z3M2 114 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 PAX4O43316 350 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 FHL2Q14192 279 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 ZNF266Q14584 549 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 ARPC5LQ9BPX5 153 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 PTTG2Q9NZH5 202 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 MBD2Q9UBB5 411 aa16.26■□□□□ 0.19
RAB40C-209ENST00000565511 RBAKDNA6NC62 111 aa16.25■□□□□ 0.19
RAB40C-209ENST00000565511 DIRC3C9JPN6 131 aa16.25■□□□□ 0.19
RAB40C-209ENST00000565511 C8orf49Q96NF6 230 aa16.25■□□□□ 0.19
RAB40C-209ENST00000565511 TRBV7-9A0A0J9YWB2 115 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 SSNA1O43805 119 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 NXPH4O95158 308 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 CRYBA4P53673 196 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 ZNF415Q09FC8 603 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 ICOSQ9Y6W8 199 aa16.24■□□□□ 0.19
RAB40C-209ENST00000565511 SFTA3P0C7M3 94 aa16.23■□□□□ 0.19
RAB40C-209ENST00000565511 RPL12P30050 165 aaKnown RBP16.23■□□□□ 0.19
RAB40C-209ENST00000565511 Q6AWC8 147 aa16.23■□□□□ 0.19
RAB40C-209ENST00000565511 SIVA1O15304 175 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 BTF3P20290 206 aaKnown RBP16.22■□□□□ 0.19
RAB40C-209ENST00000565511 CSN1S1P47710 185 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 TMEM183BQ1AE95 376 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 KHDC3LQ587J8 217 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 TMEM183AQ8IXX5 376 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 LYPD1Q8N2G4 141 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 MAPKAPK5-AS1Q8N8E1 139 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 HYLS1Q96M11 299 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 PRO0255Q9UI72 69 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 TNFRSF18Q9Y5U5 241 aa16.22■□□□□ 0.19
RAB40C-209ENST00000565511 FUSP35637 526 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■■□□ 19.1
RAB40C-209ENST00000565511 RAB2AP61019 212 aa16.21■□□□□ 0.19
RAB40C-209ENST00000565511 ZNF479Q96JC4 524 aa16.21■□□□□ 0.19
RAB40C-209ENST00000565511 RPH3ALQ9UNE2 315 aa16.21■□□□□ 0.19
RAB40C-209ENST00000565511 TVP23CQ96ET8 276 aa16.2■□□□□ 0.18
RAB40C-209ENST00000565511 HHLA3Q9XRX5 114 aa16.2■□□□□ 0.18
RAB40C-209ENST00000565511 IFNA5P01569 189 aa16.19■□□□□ 0.18
RAB40C-209ENST00000565511 LYPD5Q6UWN5 251 aa16.19■□□□□ 0.18
RAB40C-209ENST00000565511 SCGB1C1Q8TD33 95 aa16.19■□□□□ 0.18
RAB40C-209ENST00000565511 OTORQ9NRC9 128 aa16.19■□□□□ 0.18
RAB40C-209ENST00000565511 GNG5P63218 68 aa16.18■□□□□ 0.18
RAB40C-209ENST00000565511 TRAV8-1A0A0A6YYK1 113 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 PGPA6NDG6 321 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 F6UZH7 168 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 HMGB3O15347 200 aaKnown RBP16.17■□□□□ 0.18
RAB40C-209ENST00000565511 PET100P0DJ07 73 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 TAS2R45P59539 299 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 GOLT1AQ6ZVE7 132 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 OR10G4Q8NGN3 311 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 NAGKQ9UJ70 344 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 LENEPQ9Y5L5 61 aa16.17■□□□□ 0.18
RAB40C-209ENST00000565511 GNRH2O43555 120 aa16.16■□□□□ 0.18
RAB40C-209ENST00000565511 RASL10AQ92737 203 aa16.16■□□□□ 0.18
RAB40C-209ENST00000565511 TRGV4A0A0C4DH28 118 aa16.15■□□□□ 0.18
RAB40C-209ENST00000565511 K7EQD1 137 aa16.15■□□□□ 0.18
RAB40C-209ENST00000565511 MRPL23Q16540 153 aaKnown RBP16.15■□□□□ 0.18
RAB40C-209ENST00000565511 TMED6Q8WW62 240 aa16.15■□□□□ 0.18
RAB40C-209ENST00000565511 TRGV11A0A075B6L2 103 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 IGHV3-16A0A0C4DH30 117 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 SLAQ13239 276 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 ACOT6Q3I5F7 207 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-209ENST00000565511 TDRG1Q3Y452 100 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 FAM159AQ6UWV7 190 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 WFDC10BQ8IUB3 73 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 ALG5Q9Y673 324 aa16.14■□□□□ 0.17
RAB40C-209ENST00000565511 LOC100131303A0A0U1RQF7 123 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 GYPEP15421 78 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 DEFA1P59665 94 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 DEFA3P59666 94 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 NEGR1Q7Z3B1 354 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 IQCF2Q8IXL9 164 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 Q8N1X5 172 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 SGK494Q96LW2 274 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 SPXQ9BT56 116 aa16.13■□□□□ 0.17
RAB40C-209ENST00000565511 TYMSP04818 313 aa16.12■□□□□ 0.17
RAB40C-209ENST00000565511 PQLC2Q6ZP29 291 aa16.12■□□□□ 0.17
RAB40C-209ENST00000565511 CMTM2Q8TAZ6 248 aa16.12■□□□□ 0.17
RAB40C-209ENST00000565511 DNAH10OSP0CZ25 163 aa16.11■□□□□ 0.17
RAB40C-209ENST00000565511 ARL14EPLP0DKL9 152 aa16.11■□□□□ 0.17
RAB40C-209ENST00000565511 TRAV4A0A0B4J268 109 aa16.1■□□□□ 0.17
RAB40C-209ENST00000565511 SRIP30626 198 aa16.1■□□□□ 0.17
RAB40C-209ENST00000565511 OR10G9Q8NGN4 311 aa16.1■□□□□ 0.17
RAB40C-209ENST00000565511 OR10G7Q8NGN6 311 aa16.1■□□□□ 0.17
RAB40C-209ENST00000565511 C11orf21Q9P2W6 132 aa16.1■□□□□ 0.17
RAB40C-209ENST00000565511 A0A1W2PPV4 95 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms