RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 ANXA2RQ3ZCQ2 193 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 C6orf223Q8N319 242 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 OTORQ9NRC9 128 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 GSN-AS1Q9NRJ2 163 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
CLN6-204ENST00000564752 DIRC3C9JPN6 131 aa12.87□□□□□ -0.35
CLN6-204ENST00000564752 HMGB3O15347 200 aaKnown RBP12.87□□□□□ -0.35
CLN6-204ENST00000564752 CDC34P49427 236 aaPredicted RBP12.87□□□□□ -0.35
CLN6-204ENST00000564752 OR5I1Q13606 314 aa12.87□□□□□ -0.35
CLN6-204ENST00000564752 Q5BKY6 102 aa12.87□□□□□ -0.35
CLN6-204ENST00000564752 Q6ZTI0 123 aa12.87□□□□□ -0.35
CLN6-204ENST00000564752 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
CLN6-204ENST00000564752 OR2G3Q8NGZ4 309 aa12.87□□□□□ -0.35
CLN6-204ENST00000564752 PSMG3Q9BT73 122 aaPredicted RBP12.87□□□□□ -0.35
CLN6-204ENST00000564752 DNAH5Q8TE73 4624 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 FXYD6-FXYD2A0A087WZ82 144 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 SSX7Q7RTT5 188 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
CLN6-204ENST00000564752 TRGV2A0A075B6R0 118 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 PGPA6NDG6 321 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 ARL14EPLP0DKL9 152 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 TCL1AP56279 114 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
CLN6-204ENST00000564752 GNPNAT1Q96EK6 184 aaPredicted RBP12.85□□□□□ -0.35
CLN6-204ENST00000564752 KRTAP4-5Q9BYR2 181 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 TMPRSS5Q9H3S3 457 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
CLN6-204ENST00000564752 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 TRGV1A0A0A0MS02 117 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 HOXA5P20719 270 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 Q6ZQT7 251 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 OR2T35Q8NGX2 323 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 Q9H8V8 135 aa12.84□□□□□ -0.35
CLN6-204ENST00000564752 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 MBP02144 154 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 SERF2P84101 59 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 KLF12Q9Y4X4 402 aa12.83□□□□□ -0.36
CLN6-204ENST00000564752 BORCS7-ASMTA0A0B4J1R7 106 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 A0A0J9YY99 117 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 C16orf90A8MZG2 172 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 STAG3L3P0CL85 134 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 MUC21Q5SSG8 566 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
CLN6-204ENST00000564752 SPINK4O60575 86 aa12.81□□□□□ -0.36
CLN6-204ENST00000564752 Q6AWC8 147 aa12.81□□□□□ -0.36
CLN6-204ENST00000564752 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
CLN6-204ENST00000564752 C18orf15Q96N68 181 aa12.81□□□□□ -0.36
CLN6-204ENST00000564752 APOBP04114 4563 aaKnown RBP12.8□□□□□ -0.36
CLN6-204ENST00000564752 H3BNG1 76 aa12.8□□□□□ -0.36
CLN6-204ENST00000564752 GCHFRP30047 84 aa12.8□□□□□ -0.36
CLN6-204ENST00000564752 GNG5P63218 68 aa12.8□□□□□ -0.36
CLN6-204ENST00000564752 ESRGQ1W209 222 aa12.8□□□□□ -0.36
CLN6-204ENST00000564752 ST6GAL2Q96JF0 529 aa12.8□□□□□ -0.36
CLN6-204ENST00000564752 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
CLN6-204ENST00000564752 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
CLN6-204ENST00000564752 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
CLN6-204ENST00000564752 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
CLN6-204ENST00000564752 UPK3BQ9BT76 320 aa12.79□□□□□ -0.36
CLN6-204ENST00000564752 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
CLN6-204ENST00000564752 NAGKQ9UJ70 344 aa12.79□□□□□ -0.36
CLN6-204ENST00000564752 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 SERTM2A0A1B0GWG4 89 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 F6UZH7 168 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 CXorf1O96002 111 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 C5orf17Q8NAS9 161 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
CLN6-204ENST00000564752 TRGV11A0A075B6L2 103 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 G3V3Q6 166 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 ARPC5O15511 151 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 TMEM183BQ1AE95 376 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 TTC32Q5I0X7 151 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 TREM1Q9NP99 234 aa12.77□□□□□ -0.37
CLN6-204ENST00000564752 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 K7EQM0 130 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 IGHV3-53P01767 116 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 TCRAP04437 139 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
CLN6-204ENST00000564752 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
CLN6-204ENST00000564752 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
CLN6-204ENST00000564752 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms