RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GPR61Q9BZJ8 451 aa11.7□□□□□ -0.54
COMMD4-210ENST00000564587 A0A1W2PRX2 142 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BKO60814 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 DUSP14O95147 198 aaKnown RBP11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BJP06899 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BOP23527 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BBP33778 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BDP58876 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BCP62807 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST2H2BEQ16778 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-210ENST00000564587 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 C11orf44Q8N8P7 122 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BHQ93079 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 DUX3Q96PT4 197 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 MDFIQ99750 246 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BNQ99877 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 HIST1H2BMQ99879 126 aa11.69□□□□□ -0.54
COMMD4-210ENST00000564587 SNURFLB1AK76 121 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 CRISP2P16562 243 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 RIGQ13278 110 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 DEFB114Q30KQ6 69 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 MRPL54Q6P161 138 aaKnown RBP11.68□□□□□ -0.54
COMMD4-210ENST00000564587 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
COMMD4-210ENST00000564587 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
COMMD4-210ENST00000564587 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 OR4C46A6NHA9 309 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 ZNF688P0C7X2 276 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 PRB4P10163 310 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-210ENST00000564587 TFPI2P48307 235 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 ZNF80P51504 273 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-210ENST00000564587 HBBP68871 147 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 TMEM136Q6ZRR5 245 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
COMMD4-210ENST00000564587 SPAG8Q99932 426 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-210ENST00000564587 MRPL18Q9H0U6 180 aaKnown RBP11.67□□□□□ -0.54
COMMD4-210ENST00000564587 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 A0A1B0GUT8 65 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 A0A1B0GXF2 115 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 SPINK4O60575 86 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 ORM1P02763 201 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 LEPP41159 167 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-210ENST00000564587 RAB4BP61018 213 aa11.66□□□□□ -0.54
COMMD4-210ENST00000564587 A0A0J9YX75 114 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 GPX1P07203 203 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 TSPOP30536 169 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 NDUFA6P56556 154 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.54
COMMD4-210ENST00000564587 ZFAND2AQ8N6M9 145 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
COMMD4-210ENST00000564587 ADARB2-AS1A8MUL3 147 aa11.64□□□□□ -0.55
COMMD4-210ENST00000564587 F2Z2F3 143 aa11.64□□□□□ -0.55
COMMD4-210ENST00000564587 UBE2CO00762 179 aa11.64□□□□□ -0.55
COMMD4-210ENST00000564587 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-210ENST00000564587 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-210ENST00000564587 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
COMMD4-210ENST00000564587 F6UB75 175 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 APCSP02743 223 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 GZMBP10144 247 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 HOXA5P20719 270 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 CTRLP40313 264 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 NSUN5P1Q3KNT7 163 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
COMMD4-210ENST00000564587 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 GATD1Q8NB37 220 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
COMMD4-210ENST00000564587 KLLNB2CW77 178 aa11.62□□□□□ -0.55
COMMD4-210ENST00000564587 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
COMMD4-210ENST00000564587 CAMPP49913 170 aa11.62□□□□□ -0.55
COMMD4-210ENST00000564587 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-210ENST00000564587 TMSB15BA0A087X1C1 80 aa11.61□□□□□ -0.55
COMMD4-210ENST00000564587 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
COMMD4-210ENST00000564587 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
COMMD4-210ENST00000564587 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 PF4P02776 101 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 FRMD6-AS1P0C7T7 363 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 DEFB131AP59861 70 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 KCNS1Q96KK3 526 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 CNFNQ9BYD5 112 aa11.6□□□□□ -0.55
COMMD4-210ENST00000564587 A8MTW9 85 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 ARMS2P0C7Q2 107 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 HLA-DRB4P13762 266 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
COMMD4-210ENST00000564587 CDKN1BP46527 198 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 DEFB1P60022 68 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 CACNG7P62955 275 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 Q0VG73 95 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 ZNF493Q6ZR52 646 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
COMMD4-210ENST00000564587 TPPP3Q9BW30 176 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms