RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 MUC21Q5SSG8 566 aa17.61■□□□□ 0.41
AC009041.3-201ENST00000564390 ZNRF2Q8NHG8 242 aa17.61■□□□□ 0.41
AC009041.3-201ENST00000564390 RXFP4Q8TDU9 374 aa17.61■□□□□ 0.41
AC009041.3-201ENST00000564390 ARPC5LQ9BPX5 153 aa17.61■□□□□ 0.41
AC009041.3-201ENST00000564390 TRBV7-9A0A0J9YWB2 115 aa17.6■□□□□ 0.41
AC009041.3-201ENST00000564390 ARL14EPLP0DKL9 152 aa17.6■□□□□ 0.41
AC009041.3-201ENST00000564390 CDC34P49427 236 aaPredicted RBP17.6■□□□□ 0.41
AC009041.3-201ENST00000564390 CMTM2Q8TAZ6 248 aa17.6■□□□□ 0.41
AC009041.3-201ENST00000564390 MRPL16Q9NX20 251 aaKnown RBP17.6■□□□□ 0.41
AC009041.3-201ENST00000564390 SPINK4O60575 86 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 ATP6V0CP27449 155 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 GNG5P63218 68 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 IBA57Q5T440 356 aaKnown RBP17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 GOLT1AQ6ZVE7 132 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 SSX7Q7RTT5 188 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 SH3BGRL3Q9H299 93 aa17.59■□□□□ 0.41
AC009041.3-201ENST00000564390 DNAH17Q9UFH2 4485 aa17.58■□□□□ 0.41
AC009041.3-201ENST00000564390 FXYD6-FXYD2A0A087WZ82 144 aa17.58■□□□□ 0.4
AC009041.3-201ENST00000564390 OR2G3Q8NGZ4 309 aa17.58■□□□□ 0.4
AC009041.3-201ENST00000564390 FAM74A1Q5RGS3 127 aa17.57■□□□□ 0.4
AC009041.3-201ENST00000564390 C1orf134Q5TEV5 83 aa17.57■□□□□ 0.4
AC009041.3-201ENST00000564390 PSMG3Q9BT73 122 aaPredicted RBP17.57■□□□□ 0.4
AC009041.3-201ENST00000564390 IGHV3-53P01767 116 aa17.56■□□□□ 0.4
AC009041.3-201ENST00000564390 ZNF415Q09FC8 603 aa17.56■□□□□ 0.4
AC009041.3-201ENST00000564390 TRAV8-1A0A0A6YYK1 113 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 NBDYA0A0U1RRE5 68 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 RNF222A6NCQ9 220 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 Q6AWC8 147 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 RAB24Q969Q5 203 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 VSIG2Q96IQ7 327 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 C18orf15Q96N68 181 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 NAGKQ9UJ70 344 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 LENEPQ9Y5L5 61 aa17.55■□□□□ 0.4
AC009041.3-201ENST00000564390 F6UZH7 168 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 STAG3L2P0CL84 134 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 STAG3L3P0CL85 134 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 SOHLH1Q5JUK2 328 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 RPL7L1Q6DKI1 246 aaKnown RBP17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 INO80EQ8NBZ0 244 aaPredicted RBP17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 ASB13Q8WXK3 278 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 MDFICQ9P1T7 246 aa17.54■□□□□ 0.4
AC009041.3-201ENST00000564390 H3BNG1 76 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 TMEM183BQ1AE95 376 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 RGS21Q2M5E4 152 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 TMEM183AQ8IXX5 376 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 OR2T35Q8NGX2 323 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 TNFSF18Q9UNG2 199 aa17.53■□□□□ 0.4
AC009041.3-201ENST00000564390 GCHFRP30047 84 aa17.52■□□□□ 0.4
AC009041.3-201ENST00000564390 ESRGQ1W209 222 aa17.52■□□□□ 0.4
AC009041.3-201ENST00000564390 TVP23CQ96ET8 276 aa17.52■□□□□ 0.4
AC009041.3-201ENST00000564390 ST6GAL2Q96JF0 529 aa17.52■□□□□ 0.4
AC009041.3-201ENST00000564390 SGK494Q96LW2 274 aa17.52■□□□□ 0.4
AC009041.3-201ENST00000564390 FAM159AQ6UWV7 190 aa17.51■□□□□ 0.39
AC009041.3-201ENST00000564390 A0A096LPF7 62 aa17.5■□□□□ 0.39
AC009041.3-201ENST00000564390 MBP02144 154 aa17.5■□□□□ 0.39
AC009041.3-201ENST00000564390 SERF2P84101 59 aa17.5■□□□□ 0.39
AC009041.3-201ENST00000564390 G3V3Q6 166 aa17.49■□□□□ 0.39
AC009041.3-201ENST00000564390 IQCF2Q8IXL9 164 aa17.49■□□□□ 0.39
AC009041.3-201ENST00000564390 ARL6IP6Q8N6S5 226 aa17.49■□□□□ 0.39
AC009041.3-201ENST00000564390 TREM1Q9NP99 234 aa17.49■□□□□ 0.39
AC009041.3-201ENST00000564390 TRGV11A0A075B6L2 103 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 BORCS7-ASMTA0A0B4J1R7 106 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 C5orf17Q8NAS9 161 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 ACTR3CQ9C0K3 210 aaPredicted RBP17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 Q9H8V8 135 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 PKHD1P08F94 4074 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 HERC2O95714 4834 aa17.48■□□□□ 0.39
AC009041.3-201ENST00000564390 GGTLC3B5MD39 225 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 PAX4O43316 350 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 C6orf223Q8N319 242 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 SUN5Q8TC36 379 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 KRTAP1-5Q9BYS1 174 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 MRPS16Q9Y3D3 137 aaKnown RBP17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 MUC4Q99102 2169 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 PKD1P98161 4303 aa17.47■□□□□ 0.39
AC009041.3-201ENST00000564390 TRAV21A0A0B4J279 112 aa17.46■□□□□ 0.39
AC009041.3-201ENST00000564390 CXorf1O96002 111 aa17.46■□□□□ 0.39
AC009041.3-201ENST00000564390 TCRAP04437 139 aa17.46■□□□□ 0.39
AC009041.3-201ENST00000564390 SFTA3P0C7M3 94 aa17.46■□□□□ 0.39
AC009041.3-201ENST00000564390 C8orf49Q96NF6 230 aa17.46■□□□□ 0.39
AC009041.3-201ENST00000564390 GNRH2O43555 120 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 FHL2Q14192 279 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 ZNF726P1Q15940 193 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 TDRG1Q3Y452 100 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 UPK3BQ9BT76 320 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 TMEM167BQ9NRX6 74 aa17.45■□□□□ 0.38
AC009041.3-201ENST00000564390 KIAA1109Q2LD37 5005 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 SUMO1P63165 101 aaKnown RBP17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 TNP2Q05952 138 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 SPXQ9BT56 116 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 NDFIP1Q9BT67 221 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 PRO0255Q9UI72 69 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 ICOSQ9Y6W8 199 aa17.44■□□□□ 0.38
AC009041.3-201ENST00000564390 IGHV3-16A0A0C4DH30 117 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 SERTM2A0A1B0GWG4 89 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 SMLR1H3BR10 107 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 ARPC5O15511 151 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 TYMSP04818 313 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 CRYBA4P53673 196 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms