RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 KLK9Q9UKQ9 250 aa13.77□□□□□ -0.21
GDE1-203ENST00000564172 SONP18583 2426 aaKnown RBP13.77□□□□□ -0.21
GDE1-203ENST00000564172 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 VPREB3Q9UKI3 123 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 ATP5G3P48201 142 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 SMIM20Q8N5G0 67 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 S4R3C0 116 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 MXRA5Q9NR99 2828 aa13.76□□□□□ -0.21
GDE1-203ENST00000564172 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
GDE1-203ENST00000564172 HELTA6NFD8 242 aa13.75□□□□□ -0.21
GDE1-203ENST00000564172 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
GDE1-203ENST00000564172 K7EN84 100 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 SAMD5Q5TGI4 173 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 CITED1Q99966 193 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 NDFIP1Q9BT67 221 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 OSTCQ9NRP0 149 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 IGKV1-17P01599 117 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 IGHG4P01861 327 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 OR5AL1P0C617 328 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 MFAP4P55083 255 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 C21orf62Q9NYP8 219 aa13.74□□□□□ -0.21
GDE1-203ENST00000564172 F8W735 103 aaPredicted RBP13.73□□□□□ -0.21
GDE1-203ENST00000564172 ANAPC13Q9BS18 74 aa13.73□□□□□ -0.21
GDE1-203ENST00000564172 B5MCH6 92 aa13.72□□□□□ -0.21
GDE1-203ENST00000564172 TIGITQ495A1 244 aa13.72□□□□□ -0.21
GDE1-203ENST00000564172 CA1P00915 261 aaPredicted RBP13.72□□□□□ -0.21
GDE1-203ENST00000564172 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
GDE1-203ENST00000564172 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
GDE1-203ENST00000564172 OR9G4Q8NGQ1 327 aa13.72□□□□□ -0.21
GDE1-203ENST00000564172 C11orf52Q96A22 123 aa13.72□□□□□ -0.21
GDE1-203ENST00000564172 FBLL1A6NHQ2 334 aaKnown RBP13.71□□□□□ -0.21
GDE1-203ENST00000564172 TCL1AP56279 114 aa13.71□□□□□ -0.21
GDE1-203ENST00000564172 PATE2Q6UY27 113 aa13.71□□□□□ -0.21
GDE1-203ENST00000564172 OR4X2Q8NGF9 303 aa13.71□□□□□ -0.21
GDE1-203ENST00000564172 CHCHD1Q96BP2 118 aaKnown RBP13.71□□□□□ -0.21
GDE1-203ENST00000564172 SMIM27A0A1W2PRY6 76 aa13.71□□□□□ -0.22
GDE1-203ENST00000564172 IGHV3-23P01764 117 aa13.71□□□□□ -0.22
GDE1-203ENST00000564172 MIR17HGQ75NE6 70 aa13.71□□□□□ -0.22
GDE1-203ENST00000564172 TECRQ9NZ01 308 aaKnown RBP13.71□□□□□ -0.22
GDE1-203ENST00000564172 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
GDE1-203ENST00000564172 ID1P41134 155 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 ZNF331Q9NQX6 463 aaPredicted RBP13.7□□□□□ -0.22
GDE1-203ENST00000564172 IZUMO1RA6ND01 250 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 COX7A2P2O60397 106 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 ARL14EPLP0DKL9 152 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 ORM2P19652 201 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 RNASEKQ6P5S7 137 aaKnown RBP13.7□□□□□ -0.22
GDE1-203ENST00000564172 SMR3AQ99954 134 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
GDE1-203ENST00000564172 C10orf113Q5VZT2 155 aa13.69□□□□□ -0.22
GDE1-203ENST00000564172 ZNF502Q8TBZ5 544 aa13.69□□□□□ -0.22
GDE1-203ENST00000564172 DUX5Q96PT3 197 aa13.69□□□□□ -0.22
GDE1-203ENST00000564172 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
GDE1-203ENST00000564172 CXorf1O96002 111 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
GDE1-203ENST00000564172 SCO2A0A1W2PP80 73 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 LEPROTL1O95214 131 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 FGF6P10767 208 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 C5orf47Q569G3 176 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 MORN5Q5VZ52 161 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 PRSS22Q9GZN4 317 aa13.68□□□□□ -0.22
GDE1-203ENST00000564172 WIPF1O43516 503 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 CTSGP08311 255 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 CFHR3Q02985 330 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 LINC01545Q5VT33 79 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 TMEM86BQ8N661 226 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 C1QTNF4Q9BXJ3 329 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 RABAC1Q9UI14 185 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 FAM223BA6NKX1 122 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 H3BUA1 57 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 TRGV3P03979 118 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 C8orf88P0DMB2 117 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 LINC00305Q7Z4B0 112 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 FAM223AQ8IWN6 122 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 NAA38Q9BRA0 125 aaKnown RBP13.67□□□□□ -0.22
GDE1-203ENST00000564172 CDIP1Q9H305 208 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 TMEM160Q9NX00 188 aa13.67□□□□□ -0.22
GDE1-203ENST00000564172 TAS2R45P59539 299 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 LYZP61626 148 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 WFDC2Q14508 124 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 CCDC140Q96MF4 163 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 OTOGQ6ZRI0 2925 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 IGLV1-40P01703 118 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 GCHFRP30047 84 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 ATP6V0E2Q8NHE4 81 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 EEF1AKMT3Q96AZ1 226 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 ZNF503Q96F45 646 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 FAM167A-AS1Q96KT0 104 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
GDE1-203ENST00000564172 TRBV7-1A0A0A6YYK4 115 aa13.65□□□□□ -0.22
GDE1-203ENST00000564172 LY6G6DO95868 133 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms