RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
COMMD4-209ENST00000564068 IL17RELQ6ZVW7 336 aa9.99□□□□□ -0.81
COMMD4-209ENST00000564068 RITA1Q96K30 269 aa9.99□□□□□ -0.81
COMMD4-209ENST00000564068 MBD3L4A6NDZ8 208 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 MBD3L3A6NE82 208 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 MBD3L5A6NJ08 208 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 C1orf229Q6ZS94 237 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 MBD3L2Q8NHZ7 208 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 LOXP28300 417 aaPredicted RBP9.99□□□□□ -0.81
COMMD4-209ENST00000564068 ZNF491Q8N8L2 437 aa9.99□□□□□ -0.81
COMMD4-209ENST00000564068 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
COMMD4-209ENST00000564068 CIRBPQ14011 172 aaKnown RBP9.98□□□□□ -0.81
COMMD4-209ENST00000564068 Q8N8P6 123 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 A0A1B0GXF2 115 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 SPRY2O43597 315 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 PRADC1Q9BSG0 188 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 WISP2O76076 250 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 Q8N7P7 452 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 Q8N976 141 aa9.98□□□□□ -0.81
COMMD4-209ENST00000564068 CSPG4Q6UVK1 2322 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 KLF12Q9Y4X4 402 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 IGLV3-9A0A075B6K5 115 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 H3BRN7 92 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 SUMO2P61956 95 aaKnown RBP9.97□□□□□ -0.81
COMMD4-209ENST00000564068 ZNF672Q499Z4 452 aaPredicted RBP9.97□□□□□ -0.81
COMMD4-209ENST00000564068 MBD6Q96DN6 1003 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 MYMXA0A1B0GTQ4 84 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 IGLL5B9A064 214 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 NEGR1Q7Z3B1 354 aa9.97□□□□□ -0.81
COMMD4-209ENST00000564068 IGKV1-17P01599 117 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 HLA-DRB4P13762 266 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 HLA-DRB4X5D2U9 266 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 PTPRSQ13332 1948 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 K7EM74 188 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.81
COMMD4-209ENST00000564068 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.81
COMMD4-209ENST00000564068 TNRC6AQ8NDV7 1962 aaKnown RBP9.96□□□□□ -0.81
COMMD4-209ENST00000564068 MSMPQ1L6U9 139 aa9.96□□□□□ -0.82
COMMD4-209ENST00000564068 SIGLEC15Q6ZMC9 328 aa9.96□□□□□ -0.82
COMMD4-209ENST00000564068 PIP4P1Q86T03 277 aa9.96□□□□□ -0.82
COMMD4-209ENST00000564068 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
COMMD4-209ENST00000564068 A0A087WWL8 130 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 F8VRH5 84 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 SCGB1A1P11684 91 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 RNF5Q99942 180 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 NACAE9PAV3 2078 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 C19orf71A6NCJ1 209 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 SP5Q6BEB4 398 aaPredicted RBP9.95□□□□□ -0.82
COMMD4-209ENST00000564068 FOXI2Q6ZQN5 318 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 PPDPFLQ8WWR9 84 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 PAX8Q06710 450 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 TNFRSF18Q9Y5U5 241 aa9.95□□□□□ -0.82
COMMD4-209ENST00000564068 RRN3P1Q2M238 152 aa9.94□□□□□ -0.82
COMMD4-209ENST00000564068 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
COMMD4-209ENST00000564068 LHBP01229 141 aa9.94□□□□□ -0.82
COMMD4-209ENST00000564068 SORL1Q92673 2214 aa9.94□□□□□ -0.82
COMMD4-209ENST00000564068 A0A0G2JNJ9 132 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 C2orf82Q6UX34 121 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 VMO1Q7Z5L0 202 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 PRSS22Q9GZN4 317 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 Q9UFV3 132 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 IGKV1D-37A0A075B6S9 117 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 TEX36Q5VZQ5 186 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 NUP37Q8NFH4 326 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 SONP18583 2426 aaKnown RBP9.93□□□□□ -0.82
COMMD4-209ENST00000564068 SNRPD3P62318 126 aaKnown RBP9.93□□□□□ -0.82
COMMD4-209ENST00000564068 LINC00311Q8N616 119 aa9.93□□□□□ -0.82
COMMD4-209ENST00000564068 RNASE1P07998 156 aaKnown RBP9.92□□□□□ -0.82
COMMD4-209ENST00000564068 TMEM190Q8WZ59 177 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 CTSZQ9UBR2 303 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 DYNAPQ8N1N2 210 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 MLST8Q9BVC4 326 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 UNC80Q8N2C7 3258 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 A0A087WX48 190 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 B5MCH6 92 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 E7EQL1 145 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 CD28P10747 220 aa9.92□□□□□ -0.82
COMMD4-209ENST00000564068 VWC2LB2RUY7 222 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 DNAL4O96015 105 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 C1orf159Q96HA4 380 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 SPXQ9BT56 116 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 TRAV26-1A0A087WT03 109 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 WT1P19544 449 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-209ENST00000564068 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 IGHV3-73A0A0B4J1V6 119 aa9.91□□□□□ -0.82
COMMD4-209ENST00000564068 A0A1W2PNU3 283 aaPredicted RBP9.91□□□□□ -0.82
COMMD4-209ENST00000564068 VCYO14598 125 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms