RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZNF80P51504 273 aaPredicted RBP16.33■□□□□ 0.2
LINC01960-201ENST00000563759 ODF3L2Q3SX64 289 aa16.33■□□□□ 0.2
LINC01960-201ENST00000563759 ACTL10Q5JWF8 245 aa16.33■□□□□ 0.2
LINC01960-201ENST00000563759 IMMP2LQ96T52 175 aa16.33■□□□□ 0.2
LINC01960-201ENST00000563759 TRBV7-9A0A0J9YWB2 115 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 A0A1W2PPQ1 181 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 KNCNA6PVL3 124 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 ZNF124Q15973 351 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 APRG1Q8IVJ8 170 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 OR11H12B2RN74 326 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 PFN1P07737 140 aaKnown RBP16.31■□□□□ 0.2
LINC01960-201ENST00000563759 FAM3BP58499 235 aaPredicted RBP16.31■□□□□ 0.2
LINC01960-201ENST00000563759 OR2D3Q8NGH3 330 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 FAM19A4Q96LR4 140 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 YPEL4Q96NS1 127 aa16.31■□□□□ 0.2
LINC01960-201ENST00000563759 MCRIP2Q9BUT9 160 aaKnown RBP16.31■□□□□ 0.2
LINC01960-201ENST00000563759 TRRAPQ9Y4A5 3859 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 FABP5P3A8MUU1 101 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 GPX1P07203 203 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 HLA-DRB4P13762 266 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 CT83Q5H943 113 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 ZFAND2AQ8N6M9 145 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 HLA-DRB4X5D2U9 266 aa16.3■□□□□ 0.2
LINC01960-201ENST00000563759 TGIF2-C20orf24A0A0A6YYL0 155 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 COLCA2A8K830 154 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 TCL1AP56279 114 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 PRR9Q5T870 116 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 ODF3Q96PU9 254 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 CRISP2P16562 243 aa16.29■□□□□ 0.2
LINC01960-201ENST00000563759 RPL19P84098 196 aaKnown RBP16.29■□□□□ 0.2
LINC01960-201ENST00000563759 A8MWL6 223 aa16.28■□□□□ 0.2
LINC01960-201ENST00000563759 LEPP41159 167 aa16.28■□□□□ 0.2
LINC01960-201ENST00000563759 TSKUQ8WUA8 353 aa16.28■□□□□ 0.2
LINC01960-201ENST00000563759 CXCL1P09341 107 aa16.27■□□□□ 0.2
LINC01960-201ENST00000563759 CMC4P56277 68 aaPredicted RBP16.27■□□□□ 0.2
LINC01960-201ENST00000563759 SMIM27A0A1W2PRY6 76 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 TMEM189A5PLL7 270 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 H3BMM0 161 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 ORM1P02763 201 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 BEAN1Q3B7T3 259 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 WFDC9Q8NEX5 89 aa16.27■□□□□ 0.19
LINC01960-201ENST00000563759 CD7P09564 240 aa16.26■□□□□ 0.19
LINC01960-201ENST00000563759 TSPOP30536 169 aa16.26■□□□□ 0.19
LINC01960-201ENST00000563759 RNASE4P34096 147 aaKnown RBP16.26■□□□□ 0.19
LINC01960-201ENST00000563759 NEU1Q99519 415 aa16.26■□□□□ 0.19
LINC01960-201ENST00000563759 TRBV24-1A0A075B6N3 115 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 TMSB15BA0A087X1C1 80 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 KLLNB2CW77 178 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 M0R2Z0 102 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 TRAV21A0A0B4J279 112 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 XKRY2A2RUG3 117 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 GZMBP10144 247 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 IGLL1P15814 213 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 CDKN1BP46527 198 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 KIR3DS1Q14943 382 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 SPINK13Q1W4C9 94 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 FAM210BQ96KR6 192 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 NAT8BQ9UHF3 227 aa16.25■□□□□ 0.19
LINC01960-201ENST00000563759 HIGD1CA8MV81 97 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 AMTNQ6UX39 209 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 STHQ8IWL8 128 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 BTF3L4Q96K17 158 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 FAM110AQ9BQ89 295 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 GFRA4Q9GZZ7 299 aa16.24■□□□□ 0.19
LINC01960-201ENST00000563759 TRAV9-1A0A075B6T8 112 aa16.23■□□□□ 0.19
LINC01960-201ENST00000563759 RAB5AP20339 215 aa16.23■□□□□ 0.19
LINC01960-201ENST00000563759 A8MTW9 85 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 LINC01559Q495D7 138 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 Q6AWC8 147 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 Q6ZQT7 251 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 PYGO2Q9BRQ0 406 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 NAGKQ9UJ70 344 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 TRAV12-2A0A075B6T6 113 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 RPS20P60866 119 aaKnown RBP16.22■□□□□ 0.19
LINC01960-201ENST00000563759 GTSCR1Q86UQ5 136 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 GTSF1Q8WW33 167 aa16.22■□□□□ 0.19
LINC01960-201ENST00000563759 C7orf71A4D174 169 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 FAM231BA6NCW3 169 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 SPINK4O60575 86 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 GFI1BQ5VTD9 330 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 NUP35Q8NFH5 326 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 WFDC10AQ9H1F0 79 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 C11orf21Q9P2W6 132 aa16.21■□□□□ 0.19
LINC01960-201ENST00000563759 RBMY1BA6NDE4 496 aaKnown RBP16.2■□□□□ 0.18
LINC01960-201ENST00000563759 RBMY1EA6NEQ0 496 aaKnown RBP16.2■□□□□ 0.18
LINC01960-201ENST00000563759 RBMY1DP0C7P1 496 aaKnown RBP16.2■□□□□ 0.18
LINC01960-201ENST00000563759 FXYD7P58549 80 aa16.2■□□□□ 0.18
LINC01960-201ENST00000563759 TPPP3Q9BW30 176 aa16.2■□□□□ 0.18
LINC01960-201ENST00000563759 TRAV12-3A0A0B4J271 114 aa16.2■□□□□ 0.18
LINC01960-201ENST00000563759 RPS10P46783 165 aaKnown RBP16.2■□□□□ 0.18
LINC01960-201ENST00000563759 IGKV3D-20A0A0C4DH25 116 aa16.19■□□□□ 0.18
LINC01960-201ENST00000563759 PGLYRP4Q96LB8 373 aa16.19■□□□□ 0.18
LINC01960-201ENST00000563759 C19orf73Q9NVV2 129 aa16.19■□□□□ 0.18
LINC01960-201ENST00000563759 MRPL54Q6P161 138 aaKnown RBP16.18■□□□□ 0.18
LINC01960-201ENST00000563759 MUC21Q5SSG8 566 aa16.18■□□□□ 0.18
LINC01960-201ENST00000563759 TRPT1Q86TN4 253 aaKnown RBP16.18■□□□□ 0.18
LINC01960-201ENST00000563759 CLUHP3Q96NS8 147 aa16.18■□□□□ 0.18
LINC01960-201ENST00000563759 TMA7Q9Y2S6 64 aaKnown RBP16.18■□□□□ 0.18
LINC01960-201ENST00000563759 GRIFINA4D1Z8 144 aa16.17■□□□□ 0.18
LINC01960-201ENST00000563759 TYMSP04818 313 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms