RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF138P52744 262 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 HBG1P69891 147 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 HBG2P69892 147 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 STX12Q86Y82 276 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 OR10G4Q8NGN3 311 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 PCNPQ8WW12 178 aaKnown RBP12.6□□□□□ -0.39
NME3-204ENST00000563498 SDHCQ99643 169 aaPredicted RBP12.6□□□□□ -0.39
NME3-204ENST00000563498 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
NME3-204ENST00000563498 FLG2Q5D862 2391 aaPredicted RBP12.59□□□□□ -0.39
NME3-204ENST00000563498 FGF7P21781 194 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 FAM122CQ6P4D5 195 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 Q6ZSN1 163 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 RASL10AQ92737 203 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 SLC25A2Q9BXI2 301 aa12.59□□□□□ -0.39
NME3-204ENST00000563498 IGSF23A1L1A6 192 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 C5orf51A6NDU8 294 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 CRYGDP07320 174 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 GYPEP15421 78 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 NTN5Q8WTR8 489 aaPredicted RBP12.58□□□□□ -0.4
NME3-204ENST00000563498 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 FAM167A-AS1Q96KT0 104 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 C2orf50Q96LR7 162 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 NPCDR1Q9BY65 106 aa12.58□□□□□ -0.4
NME3-204ENST00000563498 GPN1Q9HCN4 374 aaPredicted RBP12.58□□□□□ -0.4
NME3-204ENST00000563498 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
NME3-204ENST00000563498 IL7P13232 177 aa12.57□□□□□ -0.4
NME3-204ENST00000563498 ZNF266Q14584 549 aa12.57□□□□□ -0.4
NME3-204ENST00000563498 GCSAMLQ5JQS6 135 aa12.57□□□□□ -0.4
NME3-204ENST00000563498 SPXQ9BT56 116 aa12.57□□□□□ -0.4
NME3-204ENST00000563498 RBM38Q9H0Z9 239 aaKnown RBP12.57□□□□□ -0.4
NME3-204ENST00000563498 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
NME3-204ENST00000563498 C9JCJ5 164 aa12.56□□□□□ -0.4
NME3-204ENST00000563498 SFTA3P0C7M3 94 aa12.56□□□□□ -0.4
NME3-204ENST00000563498 Q8TAT8 98 aa12.56□□□□□ -0.4
NME3-204ENST00000563498 OR51M1Q9H341 326 aa12.56□□□□□ -0.4
NME3-204ENST00000563498 RBAKDNA6NC62 111 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 LRCOL1A6NCL2 159 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 TIRAPP58753 221 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 S100A10P60903 97 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 IL15RAQ13261 267 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
NME3-204ENST00000563498 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
NME3-204ENST00000563498 Q6AWC8 147 aa12.54□□□□□ -0.4
NME3-204ENST00000563498 MIR17HGQ75NE6 70 aa12.54□□□□□ -0.4
NME3-204ENST00000563498 FXYD5Q96DB9 178 aa12.54□□□□□ -0.4
NME3-204ENST00000563498 LENEPQ9Y5L5 61 aa12.54□□□□□ -0.4
NME3-204ENST00000563498 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 PLA2G10O15496 165 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 PSCAO43653 123 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 TCRBP04435 133 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 CSN1S1P47710 185 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 HAMPP81172 84 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 RAB32Q13637 225 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 FAM159AQ6UWV7 190 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 SEC22CQ9BRL7 303 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 PAXXQ9BUH6 204 aa12.53□□□□□ -0.4
NME3-204ENST00000563498 IGHV3-38A0A0C4DH36 116 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 LYRM1O43325 122 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 TMEM183BQ1AE95 376 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 TDRG1Q3Y452 100 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 PHYHIPLQ96FC7 376 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
NME3-204ENST00000563498 TRAV6A0A075B6T7 132 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 IBA57-AS1B1ANH7 110 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 J3QL48 77 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 OR10J4P0C629 311 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 LINC01556Q5JQF7 62 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 Q8N814 137 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 NUDT15Q9NV35 164 aa12.51□□□□□ -0.41
NME3-204ENST00000563498 C1QBP02746 253 aa12.5□□□□□ -0.41
NME3-204ENST00000563498 THAP6Q8TBB0 222 aa12.5□□□□□ -0.41
NME3-204ENST00000563498 M0R2P5 195 aa12.49□□□□□ -0.41
NME3-204ENST00000563498 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
NME3-204ENST00000563498 OR5C1Q8NGR4 320 aa12.49□□□□□ -0.41
NME3-204ENST00000563498 TMED6Q8WW62 240 aa12.49□□□□□ -0.41
NME3-204ENST00000563498 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
NME3-204ENST00000563498 PPT1P50897 306 aa12.48□□□□□ -0.41
NME3-204ENST00000563498 NHLH2Q02577 135 aa12.48□□□□□ -0.41
NME3-204ENST00000563498 NHLRC2Q8NBF2 726 aa12.48□□□□□ -0.41
NME3-204ENST00000563498 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
NME3-204ENST00000563498 OR7C2O60412 319 aa12.47□□□□□ -0.41
NME3-204ENST00000563498 GATA1P15976 413 aaPredicted RBP12.47□□□□□ -0.41
NME3-204ENST00000563498 TRAV8-6A0A0B4J262 113 aa12.46□□□□□ -0.41
NME3-204ENST00000563498 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
NME3-204ENST00000563498 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.41
NME3-204ENST00000563498 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.41
NME3-204ENST00000563498 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.41
NME3-204ENST00000563498 FAM30AQ9NZY2 134 aa12.46□□□□□ -0.41
NME3-204ENST00000563498 NAGKQ9UJ70 344 aa12.46□□□□□ -0.41
NME3-204ENST00000563498 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
NME3-204ENST00000563498 DNAH8Q96JB1 4490 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms