RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 RIGQ13278 110 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
SMPD3-205ENST00000563455 CCL24O00175 119 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 PHOX2AO14813 284 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 CRISP2P16562 243 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 TSPOP30536 169 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 PROK1P58294 105 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 HBBP68871 147 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 COA6Q5JTJ3 125 aaKnown RBP10.45□□□□□ -0.74
SMPD3-205ENST00000563455 DMRTA1Q5VZB9 504 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 EBLN2Q6P2I7 272 aa10.45□□□□□ -0.74
SMPD3-205ENST00000563455 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 A0A1B0GUT8 65 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 OR4C46A6NHA9 309 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 UBE2CO00762 179 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 SH2D1AO60880 128 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 TRGC1P0CF51 173 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 HLA-DMBP28068 263 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 LINC00322Q6ZN03 302 aaPredicted RBP10.44□□□□□ -0.74
SMPD3-205ENST00000563455 NDUFA11Q86Y39 141 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 APRG1Q8IVJ8 170 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 OR2K2Q8NGT1 345 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 DYNLRB2Q8TF09 96 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 FRZBQ92765 325 aa10.44□□□□□ -0.74
SMPD3-205ENST00000563455 SPAG8Q99932 426 aaPredicted RBP10.44□□□□□ -0.74
SMPD3-205ENST00000563455 TRAV21A0A0B4J279 112 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 SNURFLB1AK76 121 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 LEPP41159 167 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 CRIP1P50238 77 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 IGFL4Q6B9Z1 124 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 FOXI2Q6ZQN5 318 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 ZFP82Q8N141 532 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 C8orf49Q96NF6 230 aa10.43□□□□□ -0.74
SMPD3-205ENST00000563455 A0A1B0GXF2 115 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 CSN3P07498 182 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 CD28P10747 220 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 HOXA5P20719 270 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 SLURP1P55000 103 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 TCL1AP56279 114 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
SMPD3-205ENST00000563455 RAX2Q96IS3 184 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 FAM19A4Q96LR4 140 aa10.42□□□□□ -0.74
SMPD3-205ENST00000563455 MRPL18Q9H0U6 180 aaKnown RBP10.42□□□□□ -0.74
SMPD3-205ENST00000563455 CA1P00915 261 aaPredicted RBP10.41□□□□□ -0.74
SMPD3-205ENST00000563455 APCSP02743 223 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 ORM1P02763 201 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 GPX1P07203 203 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 RAB4BP61018 213 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
SMPD3-205ENST00000563455 ERCC8Q13216 396 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 OR10J3Q5JRS4 329 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 TMEM136Q6ZRR5 245 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 GTSF1Q8WW33 167 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 KCNS1Q96KK3 526 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
SMPD3-205ENST00000563455 CITED2Q99967 270 aaPredicted RBP10.41□□□□□ -0.74
SMPD3-205ENST00000563455 PKD1L1Q8TDX9 2849 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 NDUFA6P56556 154 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 Q0VG73 95 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 DEFB114Q30KQ6 69 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 MRPL54Q6P161 138 aaKnown RBP10.4□□□□□ -0.74
SMPD3-205ENST00000563455 FER1L6-AS1Q8NA97 138 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 Q8TAT8 98 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 C20orf173Q96LM9 149 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 FAM110AQ9BQ89 295 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 CNFNQ9BYD5 112 aa10.4□□□□□ -0.74
SMPD3-205ENST00000563455 A0A0J9YX75 114 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 MED14OSP0DP75 135 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 CTRLP40313 264 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 CACNG7P62955 275 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 DEFB136Q30KP8 78 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 PGLYRP4Q96LB8 373 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 GPR61Q9BZJ8 451 aa10.39□□□□□ -0.75
SMPD3-205ENST00000563455 IGKV3-7A0A075B6H7 116 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 KLLNB2CW77 178 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 IGLC6P0CF74 106 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 S100A2P29034 98 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 DNLZQ5SXM8 178 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 ZNF493Q6ZR52 646 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 C18orf65Q6ZTR6 163 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 WFDC3Q8IUB2 231 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
SMPD3-205ENST00000563455 AMBPP02760 352 aa10.37□□□□□ -0.75
SMPD3-205ENST00000563455 INSL3P51460 131 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms