RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SLC25A2Q9BXI2 301 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF436Q9C0F3 470 aaPredicted RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 BATF3Q9NR55 127 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.18□□□□□ -1.9
LINC00254-201ENST00000563416 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 CACFD1Q9UGQ2 172 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 S4R3C0 116 aa3.18□□□□□ -1.9
LINC00254-201ENST00000563416 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 C2orf70A6NJV1 201 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 LYRM1O43325 122 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 IFNA17P01571 189 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 CTSGP08311 255 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 OR4E1P0C645 316 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 C8orf88P0DMB2 117 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 SPNP16150 400 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 CRISP2P16562 243 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 INPP1P49441 399 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 UBE2G2P60604 165 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 TNFRSF9Q07011 255 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 DHRS2Q13268 280 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF266Q14584 549 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 SMCO1Q147U7 214 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 SPINK9Q5DT21 86 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 LYG2Q86SG7 212 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 OR2K2Q8NGT1 345 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 SACSQ9NZJ4 4579 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
LINC00254-201ENST00000563416 C9orf170A2RU37 121 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 OR2T8A6NH00 312 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 NDUFA4O00483 81 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 MT-CO2P00403 227 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 TCRBP04435 133 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 CBLN1P23435 193 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 SNCAP37840 140 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 HERVK_113P61574 105 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 ZNF846Q147U1 533 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 DEFB114Q30KQ6 69 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 Q56UQ5 140 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 PLET1Q6UQ28 207 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 UNQ9165/PRO28630Q6UXU0 137 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 MRPL52Q86TS9 123 aaKnown RBP3.16□□□□□ -1.9
LINC00254-201ENST00000563416 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 C11orf72Q8NBR9 251 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 OR11H7Q8NGC8 314 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 RNASEH2CQ8TDP1 164 aaKnown RBP3.16□□□□□ -1.9
LINC00254-201ENST00000563416 DTD1Q8TEA8 209 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 RNF185Q96GF1 192 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 OR10C1Q96KK4 312 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 B9D2Q9BPU9 175 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 SAV1Q9H4B6 383 aaPredicted RBP3.16□□□□□ -1.9
LINC00254-201ENST00000563416 ENY2Q9NPA8 101 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 MRPL36Q9P0J6 103 aaKnown RBP3.16□□□□□ -1.9
LINC00254-201ENST00000563416 UFC1Q9Y3C8 167 aa3.16□□□□□ -1.9
LINC00254-201ENST00000563416 IGHV3-21A0A0B4J1V1 117 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 TRAV8-4A0A0B4J246 113 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 IZUMO1RA6ND01 250 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 CEBPZOSA8MTT3 80 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 GNG7O60262 68 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 ADAP1O75689 374 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 P01737 135 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 SLC25A4P12235 298 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 NPY1RP25929 384 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 OPRK1P41145 380 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 IFITM3Q01628 133 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 OR1S1Q8NH92 325 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 COQ8AQ8NI60 647 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 DYNLRB2Q8TF09 96 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 FAM19A4Q96LR4 140 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 ARV1Q9H2C2 271 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 DAZ1Q9NQZ3 744 aaKnown RBP3.15□□□□□ -1.91
LINC00254-201ENST00000563416 MRPL27Q9P0M9 148 aaKnown RBP3.15□□□□□ -1.91
LINC00254-201ENST00000563416 U3KQ87 197 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 CSMD3Q7Z407 3707 aa3.15□□□□□ -1.91
LINC00254-201ENST00000563416 TRAV30A0A087WSZ9 112 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 IGHV3-74A0A0B4J1X5 117 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 FAM240AA0A1B0GVK7 77 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 SYNGR2O43760 224 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 ZNF861PO60384 105 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 MED6O75586 246 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 IGKV1-17P01599 117 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 IL5P05113 134 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 IGLC1P0CG04 106 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 PRSS54Q6PEW0 395 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 TOMM20LQ6UXN7 152 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 SLC16A13Q7RTY0 426 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 FAM19A1Q7Z5A9 133 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 OR10G4Q8NGN3 311 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 ZNF431Q8TF32 576 aaPredicted RBP3.14□□□□□ -1.91
LINC00254-201ENST00000563416 CIB3Q96Q77 187 aaPredicted RBP3.14□□□□□ -1.91
LINC00254-201ENST00000563416 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 GINS3Q9BRX5 216 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 VSIRQ9H7M9 311 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 EDA2RQ9HAV5 297 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 SMPXQ9UHP9 88 aa3.14□□□□□ -1.91
LINC00254-201ENST00000563416 PLECQ15149 4684 aaKnown RBP3.14□□□□□ -1.91
LINC00254-201ENST00000563416 STARD9Q9P2P6 4700 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms