RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 IGKV3D-20A0A0C4DH25 116 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 M0R1W7 72 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 VMO1Q7Z5L0 202 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 LRBAP50851 2863 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 CSMD1Q96PZ7 3565 aa10.79□□□□□ -0.68
VPS9D1-202ENST00000561976 GRNP28799 593 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 ECSCRQ19T08 205 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 C15orf32Q32M92 178 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 RIF1Q5UIP0 2472 aaKnown RBP10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 TEX48A0A1B0GUV7 120 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 CLEC3BP05452 202 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 LAGE3Q14657 143 aa10.78□□□□□ -0.68
VPS9D1-202ENST00000561976 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.68
VPS9D1-202ENST00000561976 BUB3O43684 328 aa10.77□□□□□ -0.68
VPS9D1-202ENST00000561976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.77□□□□□ -0.68
VPS9D1-202ENST00000561976 AGPAT4-IT1Q9H0P7 198 aa10.77□□□□□ -0.68
VPS9D1-202ENST00000561976 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.68
VPS9D1-202ENST00000561976 IGLV2-18A0A075B6J9 118 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 GOSR1O95249 250 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 TMEM78Q5T7P6 136 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 PSMG3-AS1Q96PY0 264 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 TM2D2Q9BX73 214 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 RAB9AP51151 201 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 VKORC1Q9BQB6 163 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.69
VPS9D1-202ENST00000561976 RBAKDNA6NC62 111 aa10.76□□□□□ -0.69
VPS9D1-202ENST00000561976 ANKHD1Q8IWZ3 2542 aaKnown RBP10.76□□□□□ -0.69
VPS9D1-202ENST00000561976 Q8N6K4 173 aa10.76□□□□□ -0.69
VPS9D1-202ENST00000561976 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 ZNF207O43670 478 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 EFNA4P52798 201 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 CLEC19AQ6UXS0 136 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 ZNF502Q8TBZ5 544 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 NRACQ8N912 160 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 ZNF479Q96JC4 524 aa10.75□□□□□ -0.69
VPS9D1-202ENST00000561976 DCHS2Q6V1P9 2916 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 A0A087WX48 190 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 IGLL5B9A064 214 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 Q8N9W7 124 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 BSNQ9UPA5 3926 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 KLK15Q9H2R5 256 aa10.74□□□□□ -0.69
VPS9D1-202ENST00000561976 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 E9PLD3 99 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 HLA-DRB4P13762 266 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 SAMD13Q5VXD3 122 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 Q6ZQT7 251 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 FAM110DQ8TAY7 271 aaPredicted RBP10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 HLA-DRB4X5D2U9 266 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 OOSP1A8MZH6 123 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 PLNP26678 52 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 EBI3Q14213 229 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 WFDC2Q14508 124 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 C12orf74Q32Q52 190 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 MSRB2Q9Y3D2 182 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 ZFHX2Q9C0A1 2572 aaPredicted RBP10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 ZNF292O60281 2723 aa10.73□□□□□ -0.69
VPS9D1-202ENST00000561976 H3BVH4 76 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 J3KRW8 73 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 ATP6V0E1O15342 81 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 H3BMG7 143 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 TAL2Q16559 108 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 MINOS1Q5TGZ0 78 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 C8orf86Q6ZUL3 223 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 METTL26Q96S19 204 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 MINOS1-NBL1R4GNA1 71 aa10.72□□□□□ -0.69
VPS9D1-202ENST00000561976 TRAV8-2A0A0B4J237 113 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 CLPSL1A2RUU4 121 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 WFDC12Q8WWY7 111 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 MED13LQ71F56 2210 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 F8W1H4 67 aa10.71□□□□□ -0.69
VPS9D1-202ENST00000561976 A6NJY4 79 aa10.71□□□□□ -0.7
VPS9D1-202ENST00000561976 G3V318 75 aa10.71□□□□□ -0.7
VPS9D1-202ENST00000561976 H7C1H1 209 aa10.71□□□□□ -0.7
VPS9D1-202ENST00000561976 AMTNQ6UX39 209 aa10.71□□□□□ -0.7
VPS9D1-202ENST00000561976 CCDC140Q96MF4 163 aa10.71□□□□□ -0.7
VPS9D1-202ENST00000561976 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 J3QR89 54 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 OR11H1Q8NG94 326 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 OR11H2Q8NH07 326 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 SMIM2Q9BVW6 85 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 AGRNO00468 2067 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 TLN1Q9Y490 2541 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 F8VRH5 84 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 C1orf122Q6ZSJ8 110 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
VPS9D1-202ENST00000561976 HIF1ANQ9NWT6 349 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms